| New model in OGS2.0 | DPOGS215850 |
|---|---|
| Genomic Position | scaffold56:+ 232996-247405 |
| See gene structure | |
| CDS Length | 2778 |
| Paired RNAseq reads | 265 |
| Single RNAseq reads | 693 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002950 (4e-14) |
| Best Drosophila hit | Cadherin-N, isoform H (0.0) |
| Best Human hit | cadherin EGF LAG seven-pass G-type receptor 2 precursor (9e-66) |
| Best NR hit (blastp) | DN cadherin-like protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | DN cadherin-like protein [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005911 cell-cell junction GO:0016021 integral to membrane GO:0007156 homophilic cell adhesion GO:0005886 plasma membrane GO:0016339 calcium-dependent cell-cell adhesion GO:0007413 axonal fasciculation GO:0050839 cell adhesion molecule binding GO:0004872 receptor activity GO:0005887 integral to plasma membrane GO:0007155 cell adhesion GO:0007412 axon target recognition GO:0008013 beta-catenin binding GO:0007411 axon guidance GO:0005509 calcium ion binding GO:0050774 negative regulation of dendrite morphogenesis GO:0048846 axon extension involved in axon guidance GO:0016318 ommatidial rotation GO:0031290 retinal ganglion cell axon guidance GO:0045467 R7 cell development GO:0045463 R8 cell development GO:0048841 regulation of axon extension involved in axon guidance GO:0048676 axon extension involved in development |
| InterPro families | IPR020894 Cadherin conserved site IPR002126 Cadherin IPR015919 Cadherin-like |
| Orthology group | MCL10193 |
Nucleotide sequence:
ATGCAAACCGTGGTACAATTGAACGCTGCTCCAAATACTCCGGTTTTCACCCTGCAGGCC
AGAGATCCCGATACAGATCATAACATCCATTACTTCATTGTGAGAGACCGGACGGGTGGA
AGGTTTGAAGTCGATGAGAGATCTGGTGTGGTCCGAACGAGAGGCACCGATCCATTCCAA
CTAGATATGGAATATGTCTTGTATGTTAAGGCCGAGGATCAGAGCGGCCGGGTTGACGAA
CGTAGGTTCCAATCGACTCCGGAGGAGAGGCTGAGTATTGTTGGCGGAAAACGTGCACCA
CAGTTTTATTTGCCAAGCTACGAAGCAGAGATCGCTGAAAATCAGAAAAAAGATTCAGAT
ATAATTTCTGTGAAAGCGAAATCATTTGCCGATCGTGAGATACGCTACACACTGAAGGCG
CAAGGTCAAGGGGCGGGTACATTTAACATCGGCCCGACTTCAGGAATTGTCAAATTAGCG
AAAGAATTGGACTTCGAAGATTTAAGACAGCCCCATGTCTACTCCCTTGTTGTGACAGCC
ACCGAAGATTCAGGAGGATTTTCTACATCAGTAGAGTTGACGATACGAGTAACTGATGTC
AACGATAACGCACCGAAATTCGAGCTGCCTGACTATCAAGCACATAACGTAGACGAGGAT
ATACCACTTGGTACCAGCATACTCAAGGTCAAAGCCATGGACGCCGACTCCGGGAAGAAC
GCTGAAATCGAATATCTTGTATCAGATGATCACTTCAGCGTCGATTCGAACGGCATTATA
ACAAACAACAAGCAATTAGATGCTGATAACAACAACGCTTATTACGAGTTTTCTGTAACC
GCCAAAGATAAGGGAGAACCGGCAAAAACCGGTACCGCCACGGTAAGGGTTTACACGAAG
AACAAGAACGACGAGGAACCAAAGTTTTCACAACAAGTGTACACTCCCAATGTAGACGAG
AACGCTGGGCCCAACACGTTAGTAACAACCGTCGTTGCATCAGATAAAGATGGTGATAAC
GTTAGATTTGGCTTCGTTGGCGGCGGCACGAGCTCAGGTCAATTCGTCATTGAGGAGATC
ACTGGAGTTATTCGACTGCACAATAAAGCCATATCCCTGGACAGGGACAAGTACGAACTA
AATGTAACCGCCATGGATGACGGTGCATGCTGTGTTAACGGAGACGCCACTATACACACC
TCTACGGCTGTTGTGGTTGTTTTTATTACAGACGTCAACGACAATAAACCTATATTCAAA
GATTGCCCGACATATTTTCCGAAAGTCGAAGAAGGTGCACCGAACGGGAGTCCCGTCATA
AAAGTGCACGCGACCGACGAAGATAAAGGCGTTAACGGTCAGGTTAAGTATTCTATCGTC
CAGCAACCGAATCAGAAAGGCACCAAGTTCACAGTTGATGAAGAAACTGGTGAAGTTTCT
ACAAACAAGGTCTTCGACAGAGAAGGGGATGACGGGAAGTTCGTTTCCGTCACAGTAAAA
GCTACAGATCAGGGCGAACCCTCACTAGAGGGCGTTTGCTCGTTCACCGTAGAGATAACA
GATGTCAACGACAATCCACCACTTTTTGATAGACAAAAATACGTGGAGAACGTTAAACAG
GATGCCAGTATAGGCACGAATATTTTAAGAGTGTCGGCATCTGACGAGGATGCCGACAAC
AATGGTGCGATTGTATATACATTAAGCGCACCCTATAACCCCGCTGATATAGAATATTTC
GAGATCCAACCAGAATCTGGATGGATAGTTCTAAAGAAGCCTCTGGACCGGGACAGGTAT
CGACTGCGCGTGCGCGCCTCCGACAGAGGGGACCCGCCCTCCTCCGCAGACGTGGACGTT
GAGTTAGACGTGGTAGACAGGAACAATAAGCCCCCCATCTGGGACATGACCACGTATGGC
CCCGTTCACATCAAAGAGAATGTCACAGTGGGTACCGTAGTGACCAGTGTGAAAGCCAGG
TTGCGAGAAACTTACAAGTTGGAGGCTATGGCTCAAGACAAGGGCTTCCCGCCCTTGTCC
AGAACCGTGGAGGTCCAGATAGACGTAGTGGATCGCGCGAACAATCCCCCCGTATGGGAC
CACACAGTGTACGGGCCCATCTACATTCGAGAGAATTTGCCCGTCGGTGCCAAAGTGGTG
TCCGTTAAAGCAAGCTCGGGAATTGAGAACAATCCAACTGTGTTCTACCGCCTCATGCCC
GGCTCCACGGCTCAGACGAACAAATTCCATACATTTTACTTGCAACAGAGGGCCGATAAC
GGCTTCACTTGGGCGGACATTAAAGTCAACCATCCGTTAGACTACGAGAGCATTAAGGAA
TACAATCTTACAATTCGAGTAGAGAACAATGGAGCCCAGCAGTTGGCGTCGGAGGCGACT
GTGTACATCATGCTGGAAGACGTGAATGACGAGATACCGCTGTTTACAGAACGAGAACAG
GAAACTGTTCTTGAAGGAGAACCCATCGGCACCAAGGTCACGCAAGTCAACGCCATCGAT
AAGGACGGGACGTTCCCTAACAACCAAGTGTATTATTACATTGTGGATTCCCCGCGGAAC
GAGGGTAAAGATTTCTTCGAGATCAGCATGCAGACGGGAGAGATCTTCACGAAGGTGGTG
TTCGACAGGGAGAAGCAAGGAGCCTACGCACTGGAAGTTGAGGCGAGGGATGGAGCGCCC
TCTGCACGGCCTAATTCAGACAACCAGCCCAACTCAGGTAAGTTCATTATATTGACGGCC
ACTTGGATTATACTTTAA
Protein sequence:
MQTVVQLNAAPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQ
LDMEYVLYVKAEDQSGRVDERRFQSTPEERLSIVGGKRAPQFYLPSYEAEIAENQKKDSD
IISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLVVTA
TEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILKVKAMDADSGKN
AEIEYLVSDDHFSVDSNGIITNNKQLDADNNNAYYEFSVTAKDKGEPAKTGTATVRVYTK
NKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVRFGFVGGGTSSGQFVIEEI
TGVIRLHNKAISLDRDKYELNVTAMDDGACCVNGDATIHTSTAVVVVFITDVNDNKPIFK
DCPTYFPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETGEVS
TNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQ
DASIGTNILRVSASDEDADNNGAIVYTLSAPYNPADIEYFEIQPESGWIVLKKPLDRDRY
RLRVRASDRGDPPSSADVDVELDVVDRNNKPPIWDMTTYGPVHIKENVTVGTVVTSVKAR
LRETYKLEAMAQDKGFPPLSRTVEVQIDVVDRANNPPVWDHTVYGPIYIRENLPVGAKVV
SVKASSGIENNPTVFYRLMPGSTAQTNKFHTFYLQQRADNGFTWADIKVNHPLDYESIKE
YNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQETVLEGEPIGTKVTQVNAID
KDGTFPNNQVYYYIVDSPRNEGKDFFEISMQTGEIFTKVVFDREKQGAYALEVEARDGAP
SARPNSDNQPNSGKFIILTATWIIL