| New model in OGS2.0 | DPOGS208508 |
|---|---|
| Genomic Position | scaffold90:- 97377-101872 |
| See gene structure | |
| CDS Length | 1821 |
| Paired RNAseq reads | 779 |
| Single RNAseq reads | 2023 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008447 (0.0) |
| Best Drosophila hit | small bristles (9e-93) |
| Best Human hit | nuclear RNA export factor 1 isoform 1 (1e-76) |
| Best NR hit (blastp) | PREDICTED: similar to small bristles CG1664-PA [Tribolium castaneum] (2e-159) |
| Best NR hit (blastx) | PREDICTED: similar to small bristles CG1664-PA [Tribolium castaneum] (2e-138) |
| GeneOntology terms | GO:0006406 mRNA export from nucleus GO:0030534 adult behavior GO:0007616 long-term memory GO:0005635 nuclear envelope GO:0016973 poly(A)+ mRNA export from nucleus GO:0005654 nucleoplasm GO:0000166 nucleotide binding GO:0031965 nuclear membrane GO:0051168 nuclear export GO:0006378 mRNA polyadenylation |
| InterPro families | IPR009060 UBA-like IPR005637 TAP, C-terminal IPR002075 Nuclear transport factor 2 IPR018222 Nuclear transport factor 2, Eukaryote IPR001611 Leucine-rich repeat IPR012677 Nucleotide-binding, alpha-beta plait IPR015245 Tap, RNA-binding |
| Orthology group | MCL10740 |
Nucleotide sequence:
ATGCCGAAACGTGGAGGAAGAATTCGCAATTGGAAACCCAATGAACATTTTGAACATGAT
GATCGAGCTCACAGCAACAATACAAGACGTGTCAGCTTCAAATCCGGTTCATATAAGGGG
AAAAGCAAATTTCGATCCTGGAACGATGCGTCCCAACTGCTGCTCGATGGTGATATTGAC
ATGGGCGCATCTGGAGGTTACCCTATAAGGAAGGGCTTCAGAAATCAAAGAGGTCGGTTA
AGCTCTCCAGCACCCCGGACCGCCAAAAGAAAATTTATACCTGGACCTTTGCCGTGGTAT
CAGATTGTAATACCATACGGAGCTAAACATGATAAAGACGTTATTTTACGATCACTATTA
GGCTTTATATCGCCAGAAGTGTTCATACCACATTATTACAAAATAAATGGAAATACAGCT
GTTTTCTATGTTGATGATGTTAAAATTGCTGAAAAACTATATGAGGCTGATAGAAAAATT
GTTATGTCCGATGGGTTTAAACTTCTTATACTTGTAAGGAACAGTGTACCAAATGTAAAT
ATTGATGCCGATATGAAAGAGAAAATGAAACTCGTCATGGCAAAAAGATACAATGCAGCT
ACTAAAGCCTTGGACTTAACCAAATTTCATGCCGACCCAGATTTAACAGATATATTCTGT
GCACTTTTCCGACCCATCATAATGTCTGTTGCTATTGATATAATGGCAGACAATATACCG
GATTTAGAAGCACTCAACTTAAATGAAAACAAAATCCATGGAATGGAACACATGAAGGTC
CTTTGTACAAAGTTGAAGAATTTGAAGATTCTTTATTTGGGAGACAACAGGATTACAACT
CTGGCTGCTCTAGAACCTTTGAAACCTTTGCCATTGGTGGAACTTTATCTTAAAGGAAAC
CCACTAGTTTCTAGGTTCAACGATCATGATATTTACGTCAGCGACGTGCGGAAAAAATTC
CCCAAACTCATCAGATTGGATGGCGTAGACCTGCCACCAGCCATCGGCTTCGACGTATCT
GAAGATTTATCCCTCCCTTCCCGTCAACAATCCTTCCTTATAGACCCAGCCGGCCAGAAT
CTCGTTAGAGAATTCCTTACACAGTACTTCGCAATCTACGATTCCGATTCCCGTCAGCCA
TTATTAGAGGCATACCACGAAACAGCTACTATGTCAATGGCGGCCGGCTATTTAAGTAAT
GAAGGACGAAATGTACCAGGAAATAAATTAAACGCCTACATATCTAACAGTCGTAATATT
ATGAGGATAACCGACAGGGAATCCCGTCGACGTTACCTCCGTACAGGAAGACTACAAGTT
GTTTCGTTTCTGTCAGACTTACCCAAGACCAATCATGACCTGATGGGTTTTGCTGTTGAT
CTACTTGTTTTCACTCCAGCGATGATAGTGCTAACAATGAATGGTGTCTATAGAGAGACA
ACAGCATATGGCAATCCGACTCGGTCATTCCATAGGACTTTTGTTATTATACCAAATGCC
ACTGGTGGATTTTCAATTACTAATGACATGTTGTTTGTCAGTAATACTACTAAGGAGCAG
GAGGATAAGTCATTTTCTGGCGGTGAAGTAGCTCCTTCAAGTTCAACTTCAGCACCTCCT
GTGGCAACATTAGCTGCAACCCCATCATATGATGAGAATCAACGAATGATGCTTAACATG
CTCTGCCAACAAACCGGCATGAACGAACATTGGAGCGTTAACTGTCTACAAGAAACTGGT
TGGGACTATCAAAGAGCGTTGTTTATATTCAATCAACTGCAGTCGGAAGGCAAGATTCCA
CCGGACGCTTTTGTTAAGTGA
Protein sequence:
MPKRGGRIRNWKPNEHFEHDDRAHSNNTRRVSFKSGSYKGKSKFRSWNDASQLLLDGDID
MGASGGYPIRKGFRNQRGRLSSPAPRTAKRKFIPGPLPWYQIVIPYGAKHDKDVILRSLL
GFISPEVFIPHYYKINGNTAVFYVDDVKIAEKLYEADRKIVMSDGFKLLILVRNSVPNVN
IDADMKEKMKLVMAKRYNAATKALDLTKFHADPDLTDIFCALFRPIIMSVAIDIMADNIP
DLEALNLNENKIHGMEHMKVLCTKLKNLKILYLGDNRITTLAALEPLKPLPLVELYLKGN
PLVSRFNDHDIYVSDVRKKFPKLIRLDGVDLPPAIGFDVSEDLSLPSRQQSFLIDPAGQN
LVREFLTQYFAIYDSDSRQPLLEAYHETATMSMAAGYLSNEGRNVPGNKLNAYISNSRNI
MRITDRESRRRYLRTGRLQVVSFLSDLPKTNHDLMGFAVDLLVFTPAMIVLTMNGVYRET
TAYGNPTRSFHRTFVIIPNATGGFSITNDMLFVSNTTKEQEDKSFSGGEVAPSSSTSAPP
VATLAATPSYDENQRMMLNMLCQQTGMNEHWSVNCLQETGWDYQRALFIFNQLQSEGKIP
PDAFVK