| New model in OGS2.0 | DPOGS201306 |
|---|---|
| Genomic Position | scaffold2433:- 29527-36227 |
| See gene structure | |
| CDS Length | 1620 |
| Paired RNAseq reads | 194 |
| Single RNAseq reads | 506 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003055 (0.0) |
| Best Drosophila hit | CG14935, isoform B (3e-124) |
| Best Human hit | neutral and basic amino acid transport protein rBAT (3e-71) |
| Best NR hit (blastp) | alpha amylase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | alpha amylase [Bombyx mori] (5e-180) |
| GeneOntology terms | GO:0004558 alpha-glucosidase activity GO:0043169 cation binding GO:0005975 carbohydrate metabolic process |
| InterPro families | IPR017853 Glycoside hydrolase, superfamily IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR015902 Alpha amylase IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic domain IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR013780 Glycosyl hydrolase, family 13, all-beta |
| Orthology group | MCL10053 |
Nucleotide sequence:
ATGGATAGCGATGGAGATGGCATTGGTGATATTATTGGCATCACGTCAAGACTGGAATAC
TTAAAAGATCTTGGAGTGGACGCAACTTGGATATCACCGATCTACAAGTCGCCTATGAAT
GACTTCGGATACGATGTCTCCGATTATTACAGTATACAACCGGAATTCGGCACTATGGAA
GACTTCGAACAACTTCTTAAAAAGGCCAAAGAATTGAATATAAAGGTCGTGTTGGAATTC
GTACCCAATCACACTAGCAATGAGAGCGAGTGGTTCACAAAATCCTCACACCGAGACGAG
TACTACAATGATTGGTACATCTGGGAAAACGGACATCTGGACGCCAATGGACAGAGACGA
CCACCAAATAATTGGATAAGTGTTTTTAGGAAAAGCGCCTGGCACTATTCGCCAAGCCGA
GATCAGTACTACTTGCATCAATTCGGCTCCGCTCAGCCGGATTTAAACATCAGGAACCCT
GTCGTTGTCGAAGAACTAAAAAATATAATAAAGTATTGGCTTGAAAAAGGAGTTGCGGGT
ATGAGGATAAATGCAGCAAACCACTTGGTTGAAACGGATAAGGATATATTTGGCGGTAGA
TACCCCGACGAGCCAAAGACAGGAACACCTGGCGTGATGAACGAGGATTATGAATACTTA
AACCATGTTTATACAAAGGATCAAGAGGAAACATACGATCTCTTATCGCAATTCCGAGAC
GTATTTGATGCTATTACATTACGTGATAATTTGACCAGAATTATGATGACTGACGCTTAC
ACGAGTATTAAGAATGCTGTCAGGTACTACGGCGAAGGCATTCATTCCGGAGCCCACATC
CCCATGAATTACGCTCTCATCCAAGATTTGAATAAGGAATCTGATGCACGAGATATGAAA
TATGCGGTCGATCGATGGCTGACCTACAAACCACTTCGAAAGCCGGCTAATTGGGTGACA
GGCACTCATGATAAAAGCCGCGTGGCATCTCGCTTTAGACCCGAGCTGGTTGATGCCTTT
AATATGCTAGTTTTGCTTCTACCCGGGATTGCAATTACTTATATGGGCGAAGAAATTGGT
ATGGTAAATGGATTTGTGAAGTGGACTGAGACAAAAGACCCCATCGCATGTAACACTGAC
GATCCCATCAACTTCGTGGACGTCTCCAGGGATCCCGTCAGGACTCCCTTTCAATGGAGC
AATGGAAAGAATGCAGGATTTTCTGACGCGGAGAGAACGTGGTTGCCGCTAGCGGAGGGC
TATGAGAATATTAACGTGGCTAATCAGCGTTCAGCAGATCGTTCTCACTTCCAAGTATAT
CGAACCCTGACTAGCCTACGTCTTCGTCCGGCGTTCAGACTTGGCCGCTACGAGTCATTG
GCATTGAGTCACGATGTCTTCGCTTTTAAGAGGTGGTACAACGATGACGCTTACATTGTT
ATCATGAATGTCGGTAGGACGTATCAAATTGTTAATTTAACAGCGTTTGATTTGATCTTT
GGAAATTTGGAGGTAGAAGTCAGCAGTGTTCTTTCTTCCAGAACTTACAGTGATATAGTT
CAAGCAAATTACTTGGATTTGGCCGCAGACGAAGCTTTGGTTTTAAGAATGCAGGTGTGA
Protein sequence:
MDSDGDGIGDIIGITSRLEYLKDLGVDATWISPIYKSPMNDFGYDVSDYYSIQPEFGTME
DFEQLLKKAKELNIKVVLEFVPNHTSNESEWFTKSSHRDEYYNDWYIWENGHLDANGQRR
PPNNWISVFRKSAWHYSPSRDQYYLHQFGSAQPDLNIRNPVVVEELKNIIKYWLEKGVAG
MRINAANHLVETDKDIFGGRYPDEPKTGTPGVMNEDYEYLNHVYTKDQEETYDLLSQFRD
VFDAITLRDNLTRIMMTDAYTSIKNAVRYYGEGIHSGAHIPMNYALIQDLNKESDARDMK
YAVDRWLTYKPLRKPANWVTGTHDKSRVASRFRPELVDAFNMLVLLLPGIAITYMGEEIG
MVNGFVKWTETKDPIACNTDDPINFVDVSRDPVRTPFQWSNGKNAGFSDAERTWLPLAEG
YENINVANQRSADRSHFQVYRTLTSLRLRPAFRLGRYESLALSHDVFAFKRWYNDDAYIV
IMNVGRTYQIVNLTAFDLIFGNLEVEVSSVLSSRTYSDIVQANYLDLAADEALVLRMQV