| New model in OGS2.0 | DPOGS213114 |
|---|---|
| Genomic Position | scaffold320:- 71065-77843 |
| See gene structure | |
| CDS Length | 2328 |
| Paired RNAseq reads | 1749 |
| Single RNAseq reads | 4640 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007876 (0.0) |
| Best Drosophila hit | CG11880, isoform C (9e-121) |
| Best Human hit | choline transporter-like protein 2 isoform 1 (8e-70) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC001323 [Tribolium castaneum] (1e-180) |
| Best NR hit (blastx) | AGAP010343-PA [Anopheles gambiae str. PEST] (1e-152) |
| GeneOntology terms | GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR007603 Choline transporter-like |
| Orthology group | MCL10389 |
Nucleotide sequence:
ATGGGTTGCTGTGATAATTGCTGTGTGCCACCGAAAGAATCAAGAGAGCCTATAAAATAT
AATCCGAACTTCAACGGCCCGACCCGCAACCGATCATGCACGGATGTATTATTTTTGATT
ATGTTCATCCTTTTTCTTGGAGGCTGGGGCTTCGTCGGCTATTACAGTATAACACGAGGG
AGCGTTGAGAAACTTTTAGCACCTATAGACTCGAAAGGCCGCCGTTGTGGTGTGGATTCC
GGCCTTGAGGATAGGAAATATCTTGTATTCTTCAACATCGCAAAATGTCTGTCGCCCGGC
ACTCCTATAACTGGTTGTCCCACTGCACAAGTATGTGTGCAAAAGTGTCCTGAGAGAACT
TTTATATTTGAAAAAGAGTTAAGACAAAATCCAGCTTCGTTTGAACAATTAAGGCAGAAT
ATGGTGTGCACCGATGAAGTCACTAATATACAAACTATGACGTTATCGGAGGCTATCGCG
TACATGCAACAAGAAAAGTGCGCCAGTTTTGTGTTACAGAGTCAACCAGTGTTGTACCGT
TGCATCGGAGACCTCTCAGCGCTATCCTGCGAGTCACCGGCGGCCAGCTCTTCCGAGGTC
TGTGTGCGAAACCCGAAGGAAGCCCAGAAGTCCTTGATCGAAGTCTTGAATGCCATCGAT
TCTTACGTTGGCTGGTTCACCGCGAGATGGGTCACGTTTTTCACGAGGAACGAGAAAGAA
GCTCACATTGTAGTGTTGGGTCGCTGCTTTGTTAACGTCACCGCGGCTGTTGAAGTCTTG
CGAGAGGTTTCAGACCTCGATCTGGGAGAAGGACAGGTGACCGAACAATTCACCAAGTTG
CTTAAATTCAATCAGTTGTCGTCGCAGATAGTCCAGGATCTGCAGCAGTCCCGCTGGTAC
TTAGCCGGTGCTCTGATCGGCATCGTGCTGCTATGTTTTATATACATACTGCTGTTACGA
TGGCTGGTCGCGCCCGTTGTATGGGTCTCGATCGCAGGCCTTTTCGCTCTCCTTGGATTC
GCCATTTATCTTTGTTACAAGAACTACATTTACTATAAAGAAAACGTTGGCTTGTACCAG
GAAACAAATTTGAAGGGTTACGTGGAGTCAATATTCGGGAAATACCAAACATGGCTAGCT
CTGGTCATTATATTGGCAGCTATTTTTATTATTTTATTACCGGTTATCATATTTTTGAGA
AGTCGAATAACGATAGCGATAGCTCTCATACGAGAAGGCAGCAAAGCAGTAACAGCTAAT
AAGACGACGATAGTGTTTCCGATATTCCCTTGGATATTCCAATGCGCTATAATCGGTTAC
GGCGTGCTGGTCCTCATGCACTTGTTGTCTATCGGACAATCGGCCTTCCAGGTCGTTAAC
AAGAGAATCGATACCAATTGCGACTGCGGCGGCTTGTACAAAGAGGACGGCGTGTCGTGT
GATCCAGTGAGGTTCGCGGCTAGTTGTCACGACACGTCCAACGCTCTGCTGCCGTGCGCT
AACGCGACCTGTCACTACACGGGCGTCGACAGTCCACACTACATCATCTACTTGCACCTC
GTAAATTTACTAGGATTTTTCTGGGCAATGTTCTTCATAAGCGGTGTGGCAGATATGACC
CTAGCAAACACATTCTCTACGTGGTATTGGACTTACAACAAAAGAAATCTTCCTTTTTTC
ACTCTAACGTCATCAATTTATACAACAATTCGGTATCATTTAGGGACAGTTGCTTTCGGT
GCACTTATAATTGCAATAGTCCGAGTTATCAGAGTCATTTTGGAATACATAGACCATAAA
GTGAAAAAGTTTGACAACGCTTTTACGAGAGCTATACTGTGTTGTTGTCGGTGCTTCTTC
TGGTGTCTGGAGAATTTCTTGAAGTTCGTGAATAAGAATGCTTACATCATGTGCGCTATT
CACGGAAAGAATTTTTGTAAGAGCGCCAGTGACGCATTCTCGTTGCTAATGAGGAATGTG
GTCCGACTCGTCGTATTGGACAAGATGGCGGATTGGATATTCTTTCTGTCCAAGCTGTGC
ATCTCCTTGGGCGTGGGTCTGGGCGTGTTCTATTTACTGGAGTGGGGGGCGCTGTACGAG
GCGGGCGCCGCTCGTCTTCATCACCACCACGTGCCAGCAGCACTCCTCGCCATCGCCACC
TACCTCATATGTACAATCTTCTTCAATGTATACTCCACCGCTGTGGACACGCTGTTCTTA
TGTTTCCTGGAAGATTGCGAAAGAAATGACGGTTCTGAAGAGAAACCATACTTCATGTCG
AAAAATCTTATGAGGATTCTTGGGAAGAGGAACAATATTGTCAAGTAA
Protein sequence:
MGCCDNCCVPPKESREPIKYNPNFNGPTRNRSCTDVLFLIMFILFLGGWGFVGYYSITRG
SVEKLLAPIDSKGRRCGVDSGLEDRKYLVFFNIAKCLSPGTPITGCPTAQVCVQKCPERT
FIFEKELRQNPASFEQLRQNMVCTDEVTNIQTMTLSEAIAYMQQEKCASFVLQSQPVLYR
CIGDLSALSCESPAASSSEVCVRNPKEAQKSLIEVLNAIDSYVGWFTARWVTFFTRNEKE
AHIVVLGRCFVNVTAAVEVLREVSDLDLGEGQVTEQFTKLLKFNQLSSQIVQDLQQSRWY
LAGALIGIVLLCFIYILLLRWLVAPVVWVSIAGLFALLGFAIYLCYKNYIYYKENVGLYQ
ETNLKGYVESIFGKYQTWLALVIILAAIFIILLPVIIFLRSRITIAIALIREGSKAVTAN
KTTIVFPIFPWIFQCAIIGYGVLVLMHLLSIGQSAFQVVNKRIDTNCDCGGLYKEDGVSC
DPVRFAASCHDTSNALLPCANATCHYTGVDSPHYIIYLHLVNLLGFFWAMFFISGVADMT
LANTFSTWYWTYNKRNLPFFTLTSSIYTTIRYHLGTVAFGALIIAIVRVIRVILEYIDHK
VKKFDNAFTRAILCCCRCFFWCLENFLKFVNKNAYIMCAIHGKNFCKSASDAFSLLMRNV
VRLVVLDKMADWIFFLSKLCISLGVGLGVFYLLEWGALYEAGAARLHHHHVPAALLAIAT
YLICTIFFNVYSTAVDTLFLCFLEDCERNDGSEEKPYFMSKNLMRILGKRNNIVK