| New model in OGS2.0 | DPOGS200452 |
|---|---|
| Genomic Position | scaffold3735:- 12620-19863 |
| See gene structure | |
| CDS Length | 1776 |
| Paired RNAseq reads | 2000 |
| Single RNAseq reads | 4507 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | conserved hypothetical protein [Ixodes scapularis] (2e-15) |
| Best NR hit (blastx) | conserved hypothetical protein [Ixodes scapularis] (9e-18) |
| GeneOntology terms | ND |
| InterPro families | IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site IPR007110 Immunoglobulin-like |
| Orthology group | MCL25355 |
Nucleotide sequence:
ATGTTTGGTGTTATTAAATATTATATTTTTACGTACATATCAGTACTCGTATTACACGTA
GAAAAATGTATATCAGAACCGCAGATGGCGTATCTGGCACTATATAGCCCTGGCGATACA
GATTACACGGATGTACTGGTCCGTGGGGAGCATGATAACCTAACGCTGATCTGCGAGATG
CGAGGGGATATCACGCCCAGGGTGTTCGTGTGGAACTACGTCGCCGATAGCAACACTACA
AGTGCTGGCAGGTCGTTCACCCCAGAGCCCACAGAGGCTGTGGGCAGTCGTATAGAGAAG
ATTGATCTCCAGCTATCAGACAGTGGTCACTATATGTGTTCAGCGCCACCGTTCAGCGTC
ACCAAGTACATCCTGGTCCAGCGGAGGAGTCCCCAGTGCGCGCGGGGAGCGTTCTGGTGC
GGTCATAGATGTGTGCTGCCCACATACGTGTGTGACGGGTGGTCGGACTGCGAGAACGCC
GAGGACGAGGCCCCGCCGATGTGCGCGACGAATCCTTGCGCTGCTCCTGATAAGCTGAAC
TGCTCCCTCGGTCGCTGCATCTCGGAGGCGGCTTGTTGTTCGTGGCGAGGCGGGGAGAAA
GCCCTGTGCCGTCAGCCGTCCTGCTGTGACGAACATCCGAGATACTCACAGGACGGTCTC
CTGGAAGTGGAGTATCCTCCGCTGTACGAAGACAGACACTCCCCGGACGACTATGGTTTC
ATACAGTCGACCATATACACTGTGACTGCTTGCGCCTTGATCTTCATGATAGCGGTGGTT
CTGCTGGTGTCCGCGCTGTGTAAGATGCACATGAAGAGGGCCGCGCTACGGGGATACGAG
CACGCGCACAGAGACGCCCGCGGATACACTGCCCGTTTCCCTCCTCGCTACGAGGCCGCT
CGTCTTATGGAGTCCAGCGTCACCGCCAGTCCGGTCCGGAGTCTCCACCTGGGTTCACCA
ACAGCTGGTCCCAGTAGCCCTCCAGGTCCCGCACCGTCCAGGGCTTTGGCGGCATTATCT
GCTGCACTATGTTCGCGGTACCGACAGGTGCCGACTCAATGCTGTGAAGTGGAAATGAGG
GACATAACGATGCCGCAATCATCCGTGACCTCGAGTCCACCAGAGCGACCCTTGACCCTT
CAGCTCGGCCGGTTCCACTTCAACATACCAAGGTTCCGCAACGAGAGGCCCGACACTCCT
GACATAACGGAAATCAATATAGAGGACCTAGAGTTCATAAGGATGCCGTCCAACGAGACC
TACACCCTCAACGGCAGGACGATCAGGCTTTTCGGGGGCAATTTCCAAAACTACCCTCTA
ATAAACCGGCCGCCCCCCTACAATGAGGCCATGAGGCACAAATTCGGCCCACCGCCAGAA
TATTTAAGCCACGAGGTCCTCAACAACGACAGCGACGAAGACAACAGTAATATAGAAATG
CCGCCGTGCTACGAAGACCTGGCGAGCGGGCTCGGCTCTAATTACCAACCCGCCAACGAA
AATGACAGCAATCTGTTCGACACTAGAAGCCTCGTGACGGACCAGGAGACGGATTCTCAT
GTAACCTGCTTAGAGGAGTTACCGCCTAATATGAACAATAACATAGAGCACGCAGCCTCG
TACATATCAGTTATAAACTCAAATACCGAGGACAACAACAACACGTGCGTCATAGACAAC
GCGGTCGACAATGTAGAGACAATAAGCACAGTCATAGACAACCTGCCAGCCATAGACGAC
ATAAACGCCAACGATTCCATATACGGCGCATGTTGA
Protein sequence:
MFGVIKYYIFTYISVLVLHVEKCISEPQMAYLALYSPGDTDYTDVLVRGEHDNLTLICEM
RGDITPRVFVWNYVADSNTTSAGRSFTPEPTEAVGSRIEKIDLQLSDSGHYMCSAPPFSV
TKYILVQRRSPQCARGAFWCGHRCVLPTYVCDGWSDCENAEDEAPPMCATNPCAAPDKLN
CSLGRCISEAACCSWRGGEKALCRQPSCCDEHPRYSQDGLLEVEYPPLYEDRHSPDDYGF
IQSTIYTVTACALIFMIAVVLLVSALCKMHMKRAALRGYEHAHRDARGYTARFPPRYEAA
RLMESSVTASPVRSLHLGSPTAGPSSPPGPAPSRALAALSAALCSRYRQVPTQCCEVEMR
DITMPQSSVTSSPPERPLTLQLGRFHFNIPRFRNERPDTPDITEINIEDLEFIRMPSNET
YTLNGRTIRLFGGNFQNYPLINRPPPYNEAMRHKFGPPPEYLSHEVLNNDSDEDNSNIEM
PPCYEDLASGLGSNYQPANENDSNLFDTRSLVTDQETDSHVTCLEELPPNMNNNIEHAAS
YISVINSNTEDNNNTCVIDNAVDNVETISTVIDNLPAIDDINANDSIYGAC