New model in OGS2.0 | DPOGS207501  |
---|---|
Genomic Position | scaffold615:- 40528-41784 |
See gene structure | |
CDS Length | 1257 |
Paired RNAseq reads   | 889 |
Single RNAseq reads   | 2441 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001921 (0.0) |
Best Drosophila hit   | Actin-related protein 66B (0.0) |
Best Human hit | actin-related protein 3 (0.0) |
Best NR hit (blastp)   | actin [Aedes aegypti] (0.0) |
Best NR hit (blastx)   | actin [Aedes aegypti] (0.0) |
GeneOntology terms    | GO:0005884 actin filament GO:0007010 cytoskeleton organization GO:0005885 Arp2/3 protein complex GO:0003779 actin binding GO:0005200 structural constituent of cytoskeleton GO:0008335 female germline ring canal stabilization GO:0007303 cytoplasmic transport, nurse cell to oocyte GO:0007413 axonal fasciculation GO:0030589 pseudocleavage involved in syncytial blastoderm formation GO:0030037 actin filament reorganization involved in cell cycle GO:0008064 regulation of actin polymerization or depolymerization GO:0015629 actin cytoskeleton GO:0030833 regulation of actin filament polymerization GO:0005524 ATP binding GO:0006911 phagocytosis, engulfment GO:0030027 lamellipodium GO:0007520 myoblast fusion |
InterPro families    | IPR004000 Actin-like IPR015623 Actin-related protein 3 IPR020902 Actin/actin-like conserved site |
Orthology group | MCL11655 |
Nucleotide sequence:
ATGGATAATAATTTACCAGCTTGTGTTATAGATGTGGGAACTGGATACACAAAATTAGGT
TTCGCTGGTAACAAGGAACCACAGTTTATCATCCCGTCAGCCATAGCGATAAAAGAAACT
GCTAAAGTTGGTGATCAAAGTACTAGACGTATGACTAAGGCAGTGGAGGATTTAGATTTT
TTCATCGGCGATGAAGCTTTCGAAGCGACGGGATATTCAGTGAAATATCCCGTTCGTCAC
GGTCTAGTGGAGGACTGGGATCTTATGGAAAGGTACATTGAACAATGTATCTTCAAATAT
TTGCGTGCCGAACCCGAAGATCATCATTTTTTGATTACCGAACCTCCATTAAACACACCG
GAAAACCGAGAATATTTGGCCGAGATAATGTTTGAGTCATTCAATGTTCCGGGACTGTAT
ATCGCTGTCCAAGCCGTTCTCGCTCTTGCTGCTTCATGGAAGTCGCGTACATCCGCGGGA
CGTACGTTTACCGGAATTGTCGTGGACAGTGGTGATGGTGTAACACACATTGTGCCTGTA
GCTGAAGGTTATGTTATTGGATCCTGTATCAAGCATATCCCCATAGCTGGGAGGAATATC
ACTTCATTTATCCAATCACTCCTACGAGAACGTGAAGTAGGAATTCCTCCTGAGCAAAGC
TTAGAAACTGCAAAGGCAATTAAGGAGAGATATAGTTATATTTGCCCAGATATTGCTAAG
GAATTTGCTAAATATGATTCAGATCCCGGAAAATGGATGAAAAAGTATACAGGTATAAAT
GCAATCACTAAAAACCCATTTTCAGTTGATGTTGGTTATGAAAGATTTCTAGGTCCTGAA
ATTTTCTTCCATCCCGAGTTTTCTAATGCTGATTTTACTGTACCTTTAAATGAAATGGTC
GATGAAGTAATACAAAGTTGTCCAATTGATGTCCGTAGAGGATTATATGGTAATATTGTT
CTGTCCGGTGGTTCAACTATGTTTAGAGACTTTGGCAGGAGACTTCAGCGAGACATCAAG
CGTACAGTGGATGCTAGGTTAAAACTATCAACTATGTTGTCCGAGGGGCGTATAACGCCA
AAGCCGATTGATGTCCAAGTCATTTCTCACAACATGCAAAGATATGCAGTGTGGTTTGGT
GGAAGTATGTTGGGTTCAACACCAGAATTCTATCAAGTATGTCACACTAAGCAGGCATAC
ATGGAGTATGGTCCTAGTATTTGCCGGCACAATCCAGTTTTTGGAACCATGACATAA
Protein sequence:
MDNNLPACVIDVGTGYTKLGFAGNKEPQFIIPSAIAIKETAKVGDQSTRRMTKAVEDLDF
FIGDEAFEATGYSVKYPVRHGLVEDWDLMERYIEQCIFKYLRAEPEDHHFLITEPPLNTP
ENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAGRTFTGIVVDSGDGVTHIVPV
AEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKERYSYICPDIAK
EFAKYDSDPGKWMKKYTGINAITKNPFSVDVGYERFLGPEIFFHPEFSNADFTVPLNEMV
DEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKLSTMLSEGRITP
KPIDVQVISHNMQRYAVWFGGSMLGSTPEFYQVCHTKQAYMEYGPSICRHNPVFGTMT