| New model in OGS2.0 | DPOGS205495 |
|---|---|
| Genomic Position | scaffold1267:- 20392-21138 |
| See gene structure | |
| CDS Length | 747 |
| Paired RNAseq reads | 1646 |
| Single RNAseq reads | 5382 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005823 (9e-56) |
| Best Drosophila hit | heat shock protein 23 (2e-12) |
| Best Human hit | alpha-crystallin A chain (4e-09) |
| Best NR hit (blastp) | 33.6 kDa small heat shock protein [Choristoneura fumiferana] (1e-64) |
| Best NR hit (blastx) | 33.6 kDa small heat shock protein [Choristoneura fumiferana] (3e-48) |
| GeneOntology terms | GO:0009408 response to heat GO:0003779 actin binding GO:0005875 microtubule associated complex GO:0001666 response to hypoxia |
| InterPro families | IPR001436 Alpha crystallin/Heat shock protein IPR008978 HSP20-like chaperone IPR002068 Heat shock protein Hsp20 |
| Orthology group | MCL40007 |
Nucleotide sequence:
ATGTACAAGTACGCTCTCATAGTGACGGCGCTGTTCGGTCTTACCGTCTGCGAGGAGAGA
CCTCATAAGACCCAGTATGTTGACCCTTTCGCGATGATCGATCGGCATCTCACGCATTCC
CTCGCCTACCATTACCTGTGGCCGTGGAGTCAACTCATCAGAGCCGCGGCGGCTCTGGAC
GTAGAGGAGAGTTTGGAAGACCCACAGATTATCTCTGACTCGGAAAAATATCAAGTCAAT
CTCAGTGTCCGGAGATTTAAGCCGGAGGAATTAAAAATTAAAGTCAAGAATCGATACATC
ATAGTCGAAGGAAAACACAAAGAACAAGATAATGATAAAAAAATCATGGCAAATCACTTT
GTGCAACGATTCGTGTTACCACCAGGAACAAAACAAGAAGAAGTTACAGCTGTCTTGAAC
GAAAAAAATATTTTAACGATCTCGGCTCCCAAACATGAAATACCACCTCCACCTCCAGAG
AGAGAAGTTCCCATTGAAGTTCTGTCGAAGACGGAAGAGACAGAAGGTCAGACGGAAAAA
AATAAACTCGAAAAACAAACGCCGTCTCCCGTCATAGAGACGTCGGCGACGCCTGAAGAA
CAAGTCGACCCAGAGGCGACGACACACATCGGAAAAATAAGAAAGAAGGAATTGAAAACA
ACGACAAAAGCGACCAAATATAACGAAGCCACGAAAAGTATCGAAAGCAACGGATTGGAT
TATGGTGTCGTTGAAGGTGACGAGTGA
Protein sequence:
MYKYALIVTALFGLTVCEERPHKTQYVDPFAMIDRHLTHSLAYHYLWPWSQLIRAAAALD
VEESLEDPQIISDSEKYQVNLSVRRFKPEELKIKVKNRYIIVEGKHKEQDNDKKIMANHF
VQRFVLPPGTKQEEVTAVLNEKNILTISAPKHEIPPPPPEREVPIEVLSKTEETEGQTEK
NKLEKQTPSPVIETSATPEEQVDPEATTHIGKIRKKELKTTTKATKYNEATKSIESNGLD
YGVVEGDE