DPOGS205495 | ||
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Transcript | DPOGS205495-TA | 747 bp |
Protein | DPOGS205495-PA | 248 aa |
Genomic position | DPSCF300056 - 602960-603706 | |
RNAseq coverage | 1096x (Rank: top 11%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL010483 | 3e-93 | 70.97% |   |
Bombyx | BGIBMGA005823-TA | 6e-68 | 57.26% |   |
Drosophila | l(2)efl-PA | 8e-17 | 37.60% |   |
EBI UniRef50 | UniRef50_Q1AMF4 | 5e-65 | 44.67% | 33.6 kDa small heat shock protein n=1 Tax=Choristoneura fumiferana RepID=Q1AMF4_CHOFU |
NCBI RefSeq | XP_001663493.1 | 2e-19 | 39.29% | alphaA-crystallin, putative [Aedes aegypti] |
NCBI nr blastp | gi|70905472 | 2e-64 | 44.67% | 33.6 kDa small heat shock protein [Choristoneura fumiferana] |
NCBI nr blastx | gi|70905472 | 1e-63 | 45.00% | 33.6 kDa small heat shock protein [Choristoneura fumiferana] |
Group | ||||
---|---|---|---|---|
KEGG pathway | dme:Dmel_CG4533 | 5e-15 |   | |
  | K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | |
InterPro domain | [70-165] IPR002068 | 5e-21 | Heat shock protein Hsp20 | |
[56-166] IPR008978 | 1.3e-13 | HSP20-like chaperone | ||
[71-91] IPR001436 | 8e-13 | Alpha crystallin/Heat shock protein | ||
Orthology group | MCL25177 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS205495-TA
ATGTACAAGTACGCTCTCATAGTGACGGCGCTGTTCGGTCTTACCGTCTGCGAGGAGAGACCTCATAAGACCCAGTATGTTGACCCTTTCGCGATGATCGATCGGCATCTCACGCATTCCCTCGCCTACCATTACCTGTGGCCGTGGAGTCAACTCATCAGAGCCGCGGCGGCTCTGGACGTAGAGGAGAGTTTGGAAGACCCACAGATTATCTCTGACTCGGAAAAATATCAAGTCAATCTCAGTGTCCGGAGATTTAAGCCGGAGGAATTAAAAATTAAAGTCAAGAATCGATACATCATAGTCGAAGGAAAACACAAAGAACAAGATAATGATAAAAAAATCATGGCAAATCACTTTGTGCAACGATTCGTGTTACCACCAGGAACAAAACAAGAAGAAGTTACAGCTGTCTTGAACGAAAAAAATATTTTAACGATCTCGGCTCCCAAACATGAAATACCACCTCCACCTCCAGAGAGAGAAGTTCCCATTGAAGTTCTGTCGAAGACGGAAGAGACAGAAGGTCAGACGGAAAAAAATAAACTCGAAAAACAAACGCCGTCTCCCGTCATAGAGACGTCGGCGACGCCTGAAGAACAAGTCGACCCAGAGGCGACGACACACATCGGAAAAATAAGAAAGAAGGAATTGAAAACAACGACAAAAGCGACCAAATATAACGAAGCCACGAAAAGTATCGAAAGCAACGGATTGGATTATGGTGTCGTTGAAGGTGACGAGTGA
>DPOGS205495-PA
MYKYALIVTALFGLTVCEERPHKTQYVDPFAMIDRHLTHSLAYHYLWPWSQLIRAAAALDVEESLEDPQIISDSEKYQVNLSVRRFKPEELKIKVKNRYIIVEGKHKEQDNDKKIMANHFVQRFVLPPGTKQEEVTAVLNEKNILTISAPKHEIPPPPPEREVPIEVLSKTEETEGQTEKNKLEKQTPSPVIETSATPEEQVDPEATTHIGKIRKKELKTTTKATKYNEATKSIESNGLDYGVVEGDE-