| New model in OGS2.0 | DPOGS203685 |
|---|---|
| Genomic Position | scaffold120:- 156411-157693 |
| See gene structure | |
| CDS Length | 615 |
| Paired RNAseq reads | 19 |
| Single RNAseq reads | 57 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011982 (2e-06) |
| Best Drosophila hit | CG33087 (2e-18) |
| Best Human hit | low-density lipoprotein receptor-related protein 2 precursor (7e-19) |
| Best NR hit (blastp) | low-density lipoprotein receptor, putative [Ixodes scapularis] (4e-44) |
| Best NR hit (blastx) | low-density lipoprotein receptor, putative [Ixodes scapularis] (1e-55) |
| GeneOntology terms | GO:0016020 membrane GO:0005509 calcium ion binding GO:0008152 metabolic process GO:0016740 transferase activity GO:0016021 integral to membrane GO:0040010 positive regulation of growth rate GO:0040011 locomotion GO:0002119 nematode larval development GO:0010171 body morphogenesis GO:0040007 growth GO:0002009 morphogenesis of an epithelium GO:0040018 positive regulation of multicellular organism growth GO:0018996 molting cycle, collagen and cuticulin-based cuticle GO:0016477 cell migration GO:0032940 secretion by cell GO:0042395 ecdysis, collagen and cuticulin-based cuticle GO:0040017 positive regulation of locomotion GO:0015918 sterol transport GO:0016324 apical plasma membrane GO:0030139 endocytic vesicle GO:0015248 sterol transporter activity |
| InterPro families | IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site |
| Orthology group | MCL20466 |
Nucleotide sequence:
ATGTTAGATGAGAAAAGTGGAACGTCTATATGCCAAGTTGCCGTAGATTTAGAGGATCCT
ACTGGTTGCGGAGGACTCTGCGCACTGGAAACAGAAGCTTGTCAGCTTGTGGATAAGTCA
AGGGGTGTGCGTATTTGTAAATTGTTAACCCAAATCAAGTGCTCGCCTCAGGATTGGCGA
TGCCGAGACGGATTCTGTGTCCCATCTGCAGCAAGATGTGATGGTTTCATACAATGCTAC
GATCGCTCCGATGAAATGCACTGCGAATGTGATTTAAAAAAGCAATTCCGATGTGGCAAT
TCAATATCTTGTTTTCCCAACAAAAAGAAATGCGACGGTTTTATTGATTGTTGGGATGGA
TACGATGAAGTTAATTGCACTTTAGAATGTCCAGAAGATCAATTTACTTGCAATGATGGT
CAATGTATAATTTCTTCAAGATTTTGCGACGGTCTAGCCGACTGCGCGGATGGGAGCGAT
GAGCCGCAGGGATGCGGAGGGGCTTGTGGTACACATGAGGTGCAATGCCGAAACCATCGT
TGTGTGCCACGCAGTGCTGTGTGCGACGGACAAAATGACTGTGGCGATAATTCGGACGAA
TCACACTGCTCTTGA
Protein sequence:
MLDEKSGTSICQVAVDLEDPTGCGGLCALETEACQLVDKSRGVRICKLLTQIKCSPQDWR
CRDGFCVPSAARCDGFIQCYDRSDEMHCECDLKKQFRCGNSISCFPNKKKCDGFIDCWDG
YDEVNCTLECPEDQFTCNDGQCIISSRFCDGLADCADGSDEPQGCGGACGTHEVQCRNHR
CVPRSAVCDGQNDCGDNSDESHCS