| New model in OGS2.0 | DPOGS203820 |
|---|---|
| Genomic Position | scaffold120:+ 325783-326539 |
| See gene structure | |
| CDS Length | 381 |
| Paired RNAseq reads | 106 |
| Single RNAseq reads | 460 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG13298 (6e-52) |
| Best Human hit | pre-mRNA branch site protein p14 (3e-55) |
| Best NR hit (blastp) | 14 kDa subunit splicing factor 3b [Bombyx mori] (2e-66) |
| Best NR hit (blastx) | 14 kDa subunit splicing factor 3b [Bombyx mori] (3e-65) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0000166 nucleotide binding GO:0005575 cellular_component |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL13186 |
Nucleotide sequence:
ATGGCACTAGCTCTTCAAAGGCGGGCAAATGTGAGGCTGCCTCCAGAGGTTAATAGGATA
TTATATATCAGAAATTTACCATATAAAATTTCAGCTGAAGAAATGTATGATATATTCGGA
AAATATGGAGCTATTCGACAAATAAGAGTTGGAAATACTCCTGAAACCAGAGGAACCGCC
TTTGTAGTATATGAGGATATATTTGATGCCAAAAATGCATGTGATCATTTATCTGGATTT
AATGTTTGCAATCGGTATTTAGTTGTACTTTACTACAGATCAAATAAAGCATTTAAGGGT
ATGGATATTGAAAAGAAACAAGAAGAATTAGATACACTGAAAAAGAAATATGGAATTTCA
TCTGATGATTTAAGGAAATAA
Protein sequence:
MALALQRRANVRLPPEVNRILYIRNLPYKISAEEMYDIFGKYGAIRQIRVGNTPETRGTA
FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYRSNKAFKGMDIEKKQEELDTLKKKYGIS
SDDLRK