| New model in OGS2.0 | DPOGS203823 |
|---|---|
| Genomic Position | scaffold120:+ 348281-349665 |
| See gene structure | |
| CDS Length | 666 |
| Paired RNAseq reads | 25882 |
| Single RNAseq reads | 78709 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003726 (4e-101) |
| Best Drosophila hit | ribosomal protein L13, isoform B (3e-62) |
| Best Human hit | 60S ribosomal protein L13 (2e-58) |
| Best NR hit (blastp) | ribosomal protein L13 [Helicoverpa zea] (1e-116) |
| Best NR hit (blastx) | ribosomal protein L13 [Helicoverpa zea] (2e-106) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0022625 cytosolic large ribosomal subunit GO:0006412 translation GO:0005840 ribosome GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation |
| InterPro families | IPR018256 Ribosomal protein L13e, conserved site IPR001380 Ribosomal protein L13e |
| Orthology group | MCL12676 |
Nucleotide sequence:
ATGGGGAAGGGAAATAATATGATTCCTAATGGCCATTTCCATAAGGATTGGCAAAGATTT
GTTAAAACTTGGTTCAACCAACCGGCCAGAAAACAACGAAGAAGGCACAACAGAATTAAG
AAGGCTAAAGCTATCGCTCCTCGTCCTGCTGCAGGCCCTCTGAGACCGGTAGTTCGTTGT
CCTACCGTGCGATACCACACTAAAGTCCGTGCAGGTCGTGGATTCACCCTTCGTGAAATT
AGGGCTTCAGGCCTGAACCCAGCATTTGCCAGGACTATTGGTATTTCAGTTGACCCCAGA
AGACGTAACAAGTCTGTAGAGTCCCTGCAGATGAATGTACAGAGATTAAAGGAGTACCGT
GCTCGTCTCATCCTGTTCCCTAAGGGCAAGAAGGTTCTGAAGGGTGAAGCTTCTGAGGAA
GAACGTAAGTTGGCCACTCAGCTCAGAGGACCTCTGATGCCAGTTCAGCAACCAGCACCT
AAATCCAGTGCTCGTGTGATTACTGAGGAAGAAAAAGACTTCAAAGCCTATCAGTACCTA
AGAGGGGCTCGTTCCATTGCTAAGCTTGTTGGTATCCGTGCTAAGCGGCTTAAGGATGCA
GCAGAAAATCCTGATGATGTCACCAAGGCTCCAACAGCTGCCAAGGAAGGCAAAGCTAAA
AAGTGA
Protein sequence:
MGKGNNMIPNGHFHKDWQRFVKTWFNQPARKQRRRHNRIKKAKAIAPRPAAGPLRPVVRC
PTVRYHTKVRAGRGFTLREIRASGLNPAFARTIGISVDPRRRNKSVESLQMNVQRLKEYR
ARLILFPKGKKVLKGEASEEERKLATQLRGPLMPVQQPAPKSSARVITEEEKDFKAYQYL
RGARSIAKLVGIRAKRLKDAAENPDDVTKAPTAAKEGKAKK