DPOGS203823 | ||
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Transcript | DPOGS203823-TA | 666 bp |
Protein | DPOGS203823-PA | 221 aa |
Genomic position | DPSCF300010 + 2277294-2278678 | |
RNAseq coverage | 34369x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL013336 | 8e-120 | 93.18% |   |
Bombyx | BGIBMGA003726-TA | 2e-115 | 91.40% |   |
Drosophila | RpL13-PA | 2e-75 | 63.76% |   |
EBI UniRef50 | UniRef50_P41126 | 2e-73 | 63.76% | 60S ribosomal protein L13 n=184 Tax=root RepID=RL13_DROME |
NCBI RefSeq | NP_001037153.1 | 6e-114 | 91.40% | ribosomal protein L13 [Bombyx mori] |
NCBI nr blastp | gi|342356427 | 4e-117 | 93.18% | ribosomal protein L13 [Heliconius melpomene cythera] |
NCBI nr blastx | gi|342356427 | 1e-115 | 93.18% | ribosomal protein L13 [Heliconius melpomene cythera] |
Group | ||||
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Gene Ontology | GO:0005840 | 4.2e-129 | ribosome | |
GO:0006412 | 4.2e-129 | translation | ||
GO:0005622 | 4.2e-129 | intracellular | ||
GO:0003735 | 4.2e-129 | structural constituent of ribosome | ||
KEGG pathway | ame:552517 | 6e-84 |   | |
  | K02873 (RP-L13e, RPL13) | maps-> | Ribosome | |
InterPro domain | [1-212] IPR001380 | 4.2e-129 | Ribosomal protein L13e | |
Orthology group | MCL12436 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS203823-TA
ATGGGGAAGGGAAATAATATGATTCCTAATGGCCATTTCCATAAGGATTGGCAAAGATTTGTTAAAACTTGGTTCAACCAACCGGCCAGAAAACAACGAAGAAGGCACAACAGAATTAAGAAGGCTAAAGCTATCGCTCCTCGTCCTGCTGCAGGCCCTCTGAGACCGGTAGTTCGTTGTCCTACCGTGCGATACCACACTAAAGTCCGTGCAGGTCGTGGATTCACCCTTCGTGAAATTAGGGCTTCAGGCCTGAACCCAGCATTTGCCAGGACTATTGGTATTTCAGTTGACCCCAGAAGACGTAACAAGTCTGTAGAGTCCCTGCAGATGAATGTACAGAGATTAAAGGAGTACCGTGCTCGTCTCATCCTGTTCCCTAAGGGCAAGAAGGTTCTGAAGGGTGAAGCTTCTGAGGAAGAACGTAAGTTGGCCACTCAGCTCAGAGGACCTCTGATGCCAGTTCAGCAACCAGCACCTAAATCCAGTGCTCGTGTGATTACTGAGGAAGAAAAAGACTTCAAAGCCTATCAGTACCTAAGAGGGGCTCGTTCCATTGCTAAGCTTGTTGGTATCCGTGCTAAGCGGCTTAAGGATGCAGCAGAAAATCCTGATGATGTCACCAAGGCTCCAACAGCTGCCAAGGAAGGCAAAGCTAAAAAGTGA
>DPOGS203823-PA
MGKGNNMIPNGHFHKDWQRFVKTWFNQPARKQRRRHNRIKKAKAIAPRPAAGPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPAFARTIGISVDPRRRNKSVESLQMNVQRLKEYRARLILFPKGKKVLKGEASEEERKLATQLRGPLMPVQQPAPKSSARVITEEEKDFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDDVTKAPTAAKEGKAKK-