| Genomic Position | scaffold1623:- 15674-22870 |
|---|---|
| See gene structure | |
| CDS Length | 2172 |
| Paired RNAseq reads | 962 |
| Single RNAseq reads | 3534 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013472 (2e-07) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (6e-110) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (7e-108) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10014 |
Nucleotide sequence:
ATGGAGGACTTCGAGGTGCGAGCCCTTTGCTCTCCTCCTATAAGACCTTTAATTTATAAA
CGGTATGTAGATGACACCTTCACAATATTAAATAAAAATAAAACATCTGCTTTTCTGAAC
CATCTCAATTCTATCAATAGTAAGATTCAGTGTACTATAGAATTGGAGGCAAATAATTCT
TTAGCTTTCCTTGATATACTTGTTGTTAGGAATCCTGACAATACTTTGGGACATACTGTT
TATAGGAAACCCACACATACGGACAGGTACCTCAATGGTTACTCACACCACCACCCTATC
CAGTTAGCTACCGTTGGCAAATCTTTGTTACAGAGAGCCCAACATCTTTGTGATGCTGAC
CACCTAGAGGCCGAGCTGCAGCATGTAAAACATGCTCTCACTATCAACAACCTGCCCGTG
CCTCGCCAGCATCGCAAGAAGCACCTGAAGCCACCCACAGTTGAACGACAACCTGCGATA
CTACCATATGTGAAGGGAGTTACTGACAGAATAGGCAACATCTTGAAGAAGGTTTCCATT
AAAACTATTTACAAACCACATAAGAAAGTGAGCCAATTCTTGAGACCAATCAAGAGTAAC
ATTCCTTTACAACAAGCGGGTGTATACAAACTCGACTGTGACTGTGTCTTGTCATACATT
GGACAGACGAAGAGGAGCATCGGTACAAGGGTTAAGGAACACATCTCAGATATCAAAAAC
AGGCGCGCGTCGAAGTCAGCAGTGTGTGAACACACAATGGACAAACCAGGCCACTACATT
CGTTTTGATAAACCTCAAATCCTCGCTCGGGAAGACAAGTATATACCGAGATTAATTCGC
GAGGCTATTGAAATTAAAAAACATCCCAATTTCAATAGAGAAGATGGCTGGAATCTATCA
AACACCTGGGACCCCGTTCTTAAAAATATAAAATCCCATGTCCGAAACCACACCGCAGGA
CCTCAAGACACCGTGAGCGCATTCTGCCGGCATCCAGAGCGGTACGCCAGAAAATTAAGA
AATCGATGGCGGCTATCGAGGGCCATTGAACCTCTTCTTCGCAGAGAACAGGCTGGATTC
CGACCCAACAGATCGTGCACCGACCAGATTATTACCTTACGCATAATCCTCGAACAAGCA
TCAGAATGGCAGAGGGAAATGTATTTGACCTTTGTGGATTTCGAAAAAGCTTTCGACACG
CTGAGATGGACAGGTATCTGGGAACGTTTACGTGAAGTTGGAGTCCCCGACAAAATAATC
AACCTGATAAAAGCCCTCTACAGGAAATATTCCTGTAAAGTAATTCACAACGGTCTTTTG
TCGGAGGACATACCAGTCAATGCAGGTGTTCGCCAGGGGTGTCTCCTTTCTCCTATTCTC
TTCCTTGTCGTTCTGGATGGTATCATGCAGAAAGTGACGAAAAGCAAGCGCCGCGGCATA
GAATGGGGACTGTCCAGCACTTTGGAAGATTTGGACTATGCCGATGACCTATGCCTGCTG
AGCCATACACACGCCAACATGCAAACCAAACTGGACGACCTACGACGAGAAGCATTAGAG
ATGGGGCTAAAAATAAACACGCGAAAGACCCAGGAGATGAGGTGCGGAGCAACAACCTCT
CTGCCGTTGCTCATTGGCACAGAGGCTATAGAAAAAATCCACAAATACACCTACCTAGGA
AGCATAGTATCGGAGAGTGGAGGTGCCGAAGAGGACATCGCTTCGAGAATCGCCAAATCA
AGAGCAGCCTTCGCGCAACTCCGTCCTGTATGGCAGTCGCGGAAACTAACCAGGAGAGTT
AAACTCAAAATATTCCGGTCCAACGTCAAATCCGTGCTGTTATACGGATGTGAGACGTGG
AAGGTTACTAAGGACATCTCGCATCGGCTTCAGGTCTTCGTCAATTGGTGTCTTCGCCGT
ATTCTCGGTATTTACTGGCCCGAGAAAATTTCCAACGTTAATCTCTGGGAACGCTGCGGT
GAGACACCGATTGACCTGCAAATCAAACGTCGCAAGTGGAAGTGGATCGGCCACGCGCTC
CGAAGGGATCCGGAACACATACCGAAACAAGCCCTAGACTGGACCCCTGAAGGAAAGCGG
AAACGACGAGATGGCGGCGTACTGTGGCTTCATCTAGGGGACATAGGACCAAGTAGAGAA
GAAGAGAATTAG
Protein sequence:
MEDFEVRALCSPPIRPLIYKRYVDDTFTILNKNKTSAFLNHLNSINSKIQCTIELEANNS
LAFLDILVVRNPDNTLGHTVYRKPTHTDRYLNGYSHHHPIQLATVGKSLLQRAQHLCDAD
HLEAELQHVKHALTINNLPVPRQHRKKHLKPPTVERQPAILPYVKGVTDRIGNILKKVSI
KTIYKPHKKVSQFLRPIKSNIPLQQAGVYKLDCDCVLSYIGQTKRSIGTRVKEHISDIKN
RRASKSAVCEHTMDKPGHYIRFDKPQILAREDKYIPRLIREAIEIKKHPNFNREDGWNLS
NTWDPVLKNIKSHVRNHTAGPQDTVSAFCRHPERYARKLRNRWRLSRAIEPLLRREQAGF
RPNRSCTDQIITLRIILEQASEWQREMYLTFVDFEKAFDTLRWTGIWERLREVGVPDKII
NLIKALYRKYSCKVIHNGLLSEDIPVNAGVRQGCLLSPILFLVVLDGIMQKVTKSKRRGI
EWGLSSTLEDLDYADDLCLLSHTHANMQTKLDDLRREALEMGLKINTRKTQEMRCGATTS
LPLLIGTEAIEKIHKYTYLGSIVSESGGAEEDIASRIAKSRAAFAQLRPVWQSRKLTRRV
KLKIFRSNVKSVLLYGCETWKVTKDISHRLQVFVNWCLRRILGIYWPEKISNVNLWERCG
ETPIDLQIKRRKWKWIGHALRRDPEHIPKQALDWTPEGKRKRRDGGVLWLHLGDIGPSRE
EEN