| New model in OGS2.0 | DPOGS211998 |
|---|---|
| Genomic Position | scaffold8819:- 105-2444 |
| See gene structure | |
| CDS Length | 603 |
| Paired RNAseq reads | 2353 |
| Single RNAseq reads | 5381 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000419 (9e-87) |
| Best Drosophila hit | CG9914 (3e-64) |
| Best Human hit | lambda-crystallin homolog (6e-49) |
| Best NR hit (blastp) | PREDICTED: similar to 3-hydroxyacyl-coa dehyrogenase [Nasonia vitripennis] (4e-78) |
| Best NR hit (blastx) | PREDICTED: similar to 3-hydroxyacyl-coa dehyrogenase [Nasonia vitripennis] (2e-67) |
| GeneOntology terms | GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity GO:0006631 fatty acid metabolic process GO:0070403 NAD binding |
| InterPro families | IPR016040 NAD(P)-binding domain IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding |
| Orthology group | MCL14455 |
Nucleotide sequence:
ATGGCGAGTAAATATAAAACTGAGAAAGTTGGAATTGTTGGGAGTGGTCTAATTGGGAGA
TCATGGGCCATGCTTTTCGCTTCTGTGGGTTATCAGGTTACGATATTTGACATCATTCCA
AAGCAAGTTACTGATGCGCTGGAGGATATTAAAATACAGCTGAAGACTTTGCAGAAAGAT
GGACTTCTGCGTGGATCTCTTAACGCTGATGAACAGTACAGTTGCATTAAAGGATCCACT
GATCTAGCTGTCGCTGTGAAAGACGCGATTTTCGTTCAAGAATGTGTGCCAGAAAGTTTA
GACTTAAAGAAGAAAGTTTTCCAAAACTTAGACAAGGTTGTAGATGATAAAACTATTTTA
TCAAGCTCAACCAGTACGACATTACCATCTTTATTCTCAGAAGGGTTGAAGCATAAGTCG
CAGGTAATAGTATCGCATCCAGTGAACCCACCATACTATGTGCCTTTGGTGGAAATAGTC
CCAGCGCCATGGACGAAGCCTGAAGTTGCCAAGAAAACAAGAGAAATTATGATCGAAATA
GGACAAGAGCCGGTGTCACTTACGAGAGAAATTGACGGATTTGTGCTCAACCGCATACAG
TAA
Protein sequence:
MASKYKTEKVGIVGSGLIGRSWAMLFASVGYQVTIFDIIPKQVTDALEDIKIQLKTLQKD
GLLRGSLNADEQYSCIKGSTDLAVAVKDAIFVQECVPESLDLKKKVFQNLDKVVDDKTIL
SSSTSTTLPSLFSEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMIEI
GQEPVSLTREIDGFVLNRIQ