New model in OGS2.0 | DPOGS207227  |
---|---|
Genomic Position | scaffold2098:- 18214-20797 |
See gene structure | |
CDS Length | 1242 |
Paired RNAseq reads   | 15 |
Single RNAseq reads   | 114 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008557 (2e-118) |
Best Drosophila hit   | CG9009 (1e-68) |
Best Human hit | acyl-CoA synthetase family member 3, mitochondrial precursor (7e-24) |
Best NR hit (blastp)   | PREDICTED: similar to AMP dependent coa ligase [Acyrthosiphon pisum] (3e-90) |
Best NR hit (blastx)   | PREDICTED: similar to AMP dependent coa ligase [Nasonia vitripennis] (2e-88) |
GeneOntology terms    | GO:0004467 long-chain fatty acid-CoA ligase activity GO:0008152 metabolic process |
InterPro families    | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
Orthology group | MCL10591 |
Nucleotide sequence:
ATGTTGTCAAATATACCTGAATATCCTATTATAACTTTGGGAGTATTAAGCGCAGGAGGA
ATTGTAACTACTCTGAATCCAATTTATACTTCATATGAAGTACAAAGGCAATTGATGAGT
GCGCATGTTAAGATAATAATAACTTCACCAGAGAATGTATCCACTATAAAACAAGCATTG
GATTTAAACAAAATGAGTACACCCATAATTGTAGTCGATTTCAATAGCCCACGTCCCGAT
GGAACTATATCGTTTAATGAAATTATAAACGATACTATTGACACAAGTATTTTAAAAGAA
GTCAAAACTAAACCTCGTGATGTATCATTTCTACTGTATTCGAGTGGAACAACAGGACTA
CCGAAAGGTGTAGAATTAACGCATAGAAATAAAGTTGCTAATTCTGTACAACAAGATTCC
GAAGAGATCAAACATTATAATCTAACTACAGATTCAAATCAAGACACCATTTTGTTATAT
CTTCCCATGTTCCACTCTTATGGAATGTCTGTAAAAATGTTACACAAACTTTCGGTTGGC
TTAAAGTTAGTCACTCTACCCAAATTTAAACCTGACACATTCATTAGTATTTTGGAAAAA
CATAAGATCAACCTAACGTACCTTGTTCCTCCTACAGTCTTATTTTTGGGATCAGACCCT
CAAGTGAAAAGGAAACATTTTCAGTATCTAAACTATTTGGGAACCGGTGGGGCTCCATCT
CCACGGGCAGACATAGAGAAGTTATTAGATAAAGTTGGCGTGAGTAATGTTATGGATTTC
TACATAGATATTTTAGGAGAGTTGCTTATCAAAGGACCAAACGTAATGAAAGGTTATAGG
AATAATCCAGAAGCTAACAAACTTGTTCTCACAAATGGCTGGTTTCGAACTGGAGACCGA
GCGCAGTTCGAAGAAGATGGATCTCTTGTTATTGCGGATAGATATAAAGAACTAATAAAG
GTAAATGCCTATCAAGTAGCACCAGCAGAGTTAGAAAGCGTAATAAAAGATCATCCTGGT
GTGTTTGATGTGGCTGTAGTCGGTATACCTGACAGTAAAACGGGAGAGAAACCCAAAGCT
TTTGTTGTTCTTAACAAAAATAGTCCAACAAATGAAGCGGATATTATAGAGTTTGCTAAT
AAGAAGGTCGCACCGTATAAACACATTAAGGAGGTCCAATTCATTGAGAGCATACCAAAA
AATCCATCTGGTAAAATTTTAAGGAGGTTACTTGAAAAATAA
Protein sequence:
MLSNIPEYPIITLGVLSAGGIVTTLNPIYTSYEVQRQLMSAHVKIIITSPENVSTIKQAL
DLNKMSTPIIVVDFNSPRPDGTISFNEIINDTIDTSILKEVKTKPRDVSFLLYSSGTTGL
PKGVELTHRNKVANSVQQDSEEIKHYNLTTDSNQDTILLYLPMFHSYGMSVKMLHKLSVG
LKLVTLPKFKPDTFISILEKHKINLTYLVPPTVLFLGSDPQVKRKHFQYLNYLGTGGAPS
PRADIEKLLDKVGVSNVMDFYIDILGELLIKGPNVMKGYRNNPEANKLVLTNGWFRTGDR
AQFEEDGSLVIADRYKELIKVNAYQVAPAELESVIKDHPGVFDVAVVGIPDSKTGEKPKA
FVVLNKNSPTNEADIIEFANKKVAPYKHIKEVQFIESIPKNPSGKILRRLLEK