| New model in OGS2.0 | DPOGS206284 |
|---|---|
| Genomic Position | scaffold5738:- 217-6238 |
| See gene structure | |
| CDS Length | 1752 |
| Paired RNAseq reads | 1857 |
| Single RNAseq reads | 4511 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010744 (3e-167) |
| Best Drosophila hit | protein on ecdysone puffs, isoform B (9e-33) |
| Best Human hit | cip1-interacting zinc finger protein isoform 4 (1e-05) |
| Best NR hit (blastp) | GF23899 [Drosophila ananassae] (3e-57) |
| Best NR hit (blastx) | cathepsin B mRNA 3'-untranslated-region-binding protein CBBP [Sarcophaga peregrina] (6e-64) |
| GeneOntology terms | GO:0005703 polytene chromosome puff GO:0003697 single-stranded DNA binding GO:0030530 heterogeneous nuclear ribonucleoprotein complex GO:0003677 DNA binding GO:0003727 single-stranded RNA binding GO:0005634 nucleus GO:0008270 zinc ion binding GO:0048024 regulation of nuclear mRNA splicing, via spliceosome GO:0005875 microtubule associated complex GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL18599 |
Nucleotide sequence:
ATGGCGAATCGTAGACCCCAAGGCAGTGGCAGGCGTATGGATTTCGGTAGAAATGACCGC
GGCAAGAATTTCCGTGGGGGTGTATCCCCATGGCAAGGGGGTGGTCCGGGTGGTGATCTG
CCCAATCTTCTGCCATTGGGCGGAGGCCCGACTGAGGCGACGCTAGCTTTGGCCAGCAAT
CTCATAAATCTTCTCCAACCACGTCAAAACCCCGTCCCTTCGTTACTCGACATGCCAATA
CGACGTGACTTCGGCCCTAGCATGAACCGGTATGATCGTGGTTATGGACCAAACAGGATG
GGCAATCAAGGTAATTTCCGGCGTTCGGGAAATTACAATCGCGCTGGTGAGCGTGTCCAC
AACAATCGTAAACCGTTCAGACCCAATGATGGGATCAGGCAACAAAACAAGAGCTCCCCG
AAAAAGGATGCCGATTCAAAGGCTAAGCCTGTAAAGGAGAGTGAGGAAAAGGACCAGGAA
GGTTCTGAAAGACCGGAGAAGAATGAGGAAGACAAGAAAGACGTTCCGAAGACTCGCTAC
GACGACATCAACCCTCAACTTCTGAAATGTCACATTTGTAACAAGTCTATGTGGGATGGG
CGTTCGTTTGAAAACCATCTGAGCGGTCGCGCCCACGCTATTATGATGCAAAAAACTGCG
GAGAGCTACGCGCTGACAGCTGATACGATGCGTCAAGAGTTTAAGATACGTGAAATGAAA
CGCACCCGTAAAACAGGTCAACAACCCCCCCGCGAGTTCTACTGCGCTATGTGTGATATA
TACGCTGGGGATGGTGCCATACATCGCACCACCGTGGGACACCGGAAATTGAAGAAATAT
CTACATCCAACATGTACTTCCTGTCACAAGGAAATGCCAACACGTATTGAACTGGACGAA
CATAGACTGACAGCTGAACACTTGAAGAACATGCAAGAGAAACAGGAAACTATATCCAAA
CCGAAGCCTGAAGTAATGGTGATATCAACACTTAGTATGGAACAGACTTACTTACGTGAT
GACCGTCAGCGATGGAGACGGGAGAAACACGATCGCAAGGATGAGAAACAGGATGATGCT
GATAAAGAAGTCAAGAAGGAACAAGAAGGTGAAACAGAAGGAGAAGTGAAAGCAGAAGAT
AAAAAGGAATTAAGCATCGACAATGAAAACACTGTTCTAGATTACAAGGAAGGGGTTGAA
ATTACCAACGTTACCCCCGATATGTTACCCGCTTACAGTACCGACCGCGGCGTTGGCGCG
TCCTTCTTGAGTGAATTCCGTTGCGTTCAATGCACTTTGTGTCACAAACTGTTGGATGGG
GAGGAAACGGCACAAGTACATCTCAGGACTTGGCGACACCACCAGCTGTTTGTTAGACTC
ATCAATGAGAAAGCTGGGAATATACAGCCACAGTCAGAGGCGGTGAAGCGGTCAATCAAT
GATGATTCAGGAACATGGAAACGCAGGAAGACCTCCAGGGATGAAGAAAATGGACACGAA
ATTGTTAAAGATGATCATAATGAAGGTACAGAACAGAACCAAGAAAATCCTGAGAATATG
AATGAGCTAGCAGCGGATGAGCTCGAGGATTGGGAACAGTCTGTGGATGATATACTCAAT
GATGAGAGCGAAATGATAGAGAAAGAGCTTGACACAGAAACACAAGAAGAAACACAGACA
GAAGTAGAGGAAGAAAAGAAGAGTCCGCAAGAAACATTGACTTCAACAAGAGGTATAGAA
AGAGAAATATAA
Protein sequence:
MANRRPQGSGRRMDFGRNDRGKNFRGGVSPWQGGGPGGDLPNLLPLGGGPTEATLALASN
LINLLQPRQNPVPSLLDMPIRRDFGPSMNRYDRGYGPNRMGNQGNFRRSGNYNRAGERVH
NNRKPFRPNDGIRQQNKSSPKKDADSKAKPVKESEEKDQEGSERPEKNEEDKKDVPKTRY
DDINPQLLKCHICNKSMWDGRSFENHLSGRAHAIMMQKTAESYALTADTMRQEFKIREMK
RTRKTGQQPPREFYCAMCDIYAGDGAIHRTTVGHRKLKKYLHPTCTSCHKEMPTRIELDE
HRLTAEHLKNMQEKQETISKPKPEVMVISTLSMEQTYLRDDRQRWRREKHDRKDEKQDDA
DKEVKKEQEGETEGEVKAEDKKELSIDNENTVLDYKEGVEITNVTPDMLPAYSTDRGVGA
SFLSEFRCVQCTLCHKLLDGEETAQVHLRTWRHHQLFVRLINEKAGNIQPQSEAVKRSIN
DDSGTWKRRKTSRDEENGHEIVKDDHNEGTEQNQENPENMNELAADELEDWEQSVDDILN
DESEMIEKELDTETQEETQTEVEEEKKSPQETLTSTRGIEREI