| New model in OGS2.0 | DPOGS207460 |
|---|---|
| Genomic Position | scaffold264:- 24904-26141 |
| See gene structure | |
| CDS Length | 555 |
| Paired RNAseq reads | 12079 |
| Single RNAseq reads | 72816 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001201 (1e-93) |
| Best Drosophila hit | muscle protein 20, isoform B (2e-77) |
| Best Human hit | calponin-2 isoform a (1e-30) |
| Best NR hit (blastp) | muscle protein 20-like protein [Papilio xuthus] (7e-100) |
| Best NR hit (blastx) | muscle protein 20-like protein [Papilio xuthus] (3e-98) |
| GeneOntology terms | GO:0005509 calcium ion binding GO:0043292 contractile fiber GO:0003779 actin binding GO:0008360 regulation of cell shape GO:0007155 cell adhesion GO:0007520 myoblast fusion |
| InterPro families | IPR001715 Calponin homology domain IPR000557 Calponin repeat IPR003096 Smooth muscle protein/calponin |
| Orthology group | MCL13426 |
Nucleotide sequence:
ATGTCTCTGGAACGCCAAGTCCGCGCTAAGCTCGCCTCCAAGCGTAACCCTGAACAAGAG
AAGGAGGCTCAGGGATGGATTGAAGGCGTCCTTGGCGCTAAATTCCCTCCCGGTGAACTC
TTTGAGGATGTGCTCAAGGATGGAACCGTTCTATGCCAGCTCATCAACAAACTGAAGCCA
GGATCAGTCTCCAAAATCAACACATCCGGCGGACAGTTCAAAATGATGGAGAACATTACA
AACTTCCAATCTGCCATCAAAGCGTATGGTGTTCCAGACATCGACGTCTTCCAGACTGTG
GACCTTTGGGAGAAGAAAGACATCGCGCAAGTCGTCAGCACACTCTTTGCCCTCGGCCGT
GAGACCTACAGACACCCTGAATGGAACGGCCCTTACCTAGGACCCAAGCCAGCTGAGGAA
TGCAAGCGCGATTTCTCTGAAGAAGTCCTGAAAGCCGGTCAGACCATTGTTGGTCTCCAA
GCCGGATCCAACAAGGGCGCCACTCAATCCGGTCAGAACATTGGAGCCGGTCGTAAAATC
CTCCTTGGCAAGTGA
Protein sequence:
MSLERQVRAKLASKRNPEQEKEAQGWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKP
GSVSKINTSGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGR
ETYRHPEWNGPYLGPKPAEECKRDFSEEVLKAGQTIVGLQAGSNKGATQSGQNIGAGRKI
LLGK