| New model in OGS2.0 | DPOGS200544 |
|---|---|
| Genomic Position | scaffold172:+ 22712-24341 |
| See gene structure | |
| CDS Length | 885 |
| Paired RNAseq reads | 97 |
| Single RNAseq reads | 333 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010784 (3e-119) |
| Best Drosophila hit | CG6182 (4e-41) |
| Best Human hit | TBC1 domain family member 7 isoform a (4e-53) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (3e-75) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (1e-73) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0005575 cellular_component GO:0003674 molecular_function GO:0032313 regulation of Rab GTPase activity GO:0008150 biological_process GO:0005097 Rab GTPase activator activity GO:0005622 intracellular |
| InterPro families | IPR000195 Rab-GAP/TBC domain |
| Orthology group | MCL13584 |
Nucleotide sequence:
ATGACCGATGAAAGAAACTTTAGATCATCGTATTACGAAAAAGTCGGATGTCGAGGTGTT
GAAGAAAAGAAATCCTTAGAAATATTGATGAAGGAAAAGCCTTGGGATAAGGTTAAGTTG
AAACAGTTCTGTTTGCGATTCACTGTGCCCGCTGCTTATAGAAATTTAGTATGGAAAGTG
TTACTTGATATCCTTCCGGTCTATGCTGACTCGCATACCTTTGTAGCAGAGCAGAGAACA
GATCAATATAATGATATGCTCTATGCTGTGGAAGATCTGGAACTGGTGGATATGAAAGCC
CCTCGAAGTGAGATTTTGCTGGCGATGTGGCTGCTGGAAAATGAGGAAAGGAAACCACCA
AACTTCCCGGAGACTAATTACTGTTCTGCAGATACGTTCATACCGATAGCAAATACTCTG
CTAGAGCTATATGAAAACGAGGTTGATGTTTACTGGCTCAGCAAAATGTTGACGGATGTT
GTGTGGAACATGCAGAAGGAACTGCCTCGCTTAAAGGAAGCCTTCCAAACCATGCTGGAG
AAGGAAGACGGAGAGTTGTACAATCACCTGGTTGAAGTACAGGCTTTGGACAAGTTGCCT
CTCACCAAGTGGTTCAACTGCTGTTTTGCTGGTATCTTAGATGAAACATCCCTCACCAAA
ATCTGGGATAAAATCTGCAGTGGTGCACCGAAGATCCTGTCTTTTGTAGCTGTGATGTTA
GTTGTAACCCTGAGAAGAAACATATTAAAGGCAAAGACCGCTGAACAAGTATTGAAATGT
GTGGCAGAGATTCCTGAGCAATGCGAGGAGGTAGTTGCCAATAAGGCAATAGAATTATGG
CAGTACTACGCACAACCACAGAATGACACTCTCGCTAAGAAATGA
Protein sequence:
MTDERNFRSSYYEKVGCRGVEEKKSLEILMKEKPWDKVKLKQFCLRFTVPAAYRNLVWKV
LLDILPVYADSHTFVAEQRTDQYNDMLYAVEDLELVDMKAPRSEILLAMWLLENEERKPP
NFPETNYCSADTFIPIANTLLELYENEVDVYWLSKMLTDVVWNMQKELPRLKEAFQTMLE
KEDGELYNHLVEVQALDKLPLTKWFNCCFAGILDETSLTKIWDKICSGAPKILSFVAVML
VVTLRRNILKAKTAEQVLKCVAEIPEQCEEVVANKAIELWQYYAQPQNDTLAKK