| New model in OGS2.0 | DPOGS203528 |
|---|---|
| Genomic Position | scaffold1232:- 53087-56635 |
| See gene structure | |
| CDS Length | 1053 |
| Paired RNAseq reads | 759 |
| Single RNAseq reads | 1790 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009170 (6e-153) |
| Best Drosophila hit | Rae1 (2e-146) |
| Best Human hit | mRNA export factor (4e-139) |
| Best NR hit (blastp) | mRNA export protein [Bombyx mori] (6e-180) |
| Best NR hit (blastx) | mRNA export protein [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005856 cytoskeleton GO:0005737 cytoplasm GO:0005640 nuclear outer membrane GO:0005635 nuclear envelope GO:0008017 microtubule binding GO:0005643 nuclear pore GO:0005634 nucleus GO:0006406 mRNA export from nucleus GO:0003723 RNA binding |
| InterPro families | IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR020472 G-protein beta WD-40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL13391 |
Nucleotide sequence:
ATGTTTAATCAACTTGGAGGTGCCAACAGTAATCCTAACAAGGATGTGGAGGTAGCGTCC
CCACCAGAGGATACAGTTTCCGCTCTGGAATTCTCTCCCCCTTCAGTTCCGCAGACATTC
TTAATAGCCGGCAGTTGGGATTGTCGAGTAAGATGCTGGGAGGTAGAAGCTTCTGGAAAA
ACCGTTCTAAAGGCGGTTCAGGGGATGGATGGTCCTATACTGGATGTGGCATGGCACGAT
GACGGAAGCAAAGTTTTCATGGCATCAACGGATAAGAGCGTGAAATGCTGGGATCTAGCC
AGCAACCAGACCATGCAGGTAGCGGCACATGATGCACCGGTAAAAACCTGTCATTGGATC
AAGGCTCCCAACTACACCTGCCTCATGACAGCCTCATGGGACAAAACCCTCAAGTTCTGG
GACACGAGAAGCTCGGTGCCCATAATGACTATGAACCTCACCGAACGCTGCTATTGTGCT
GATGTGGACTATCCAATGGCAGTTGTGGGTACAGCTGACAGGGGTATATGTATTTATACT
CTGGAAGGCAAACCGGCCGAATTCAAACGCGTGGAGTCGCCGCTGAAATACCAGCACCGG
TGCATCGCCATCTTTAAAGACAAGAAGACCAAACAGCCGACTGGTTTCGCGGTGGGCAGC
GTGGAAGGCCGCGTGGCCATCCAATATGTAACCCCTGCCAACCCTAAAGACAATTTCACA
TTCAAATGCCACCGCTCTGCTGGCACTACAGCTGGTTATCAAGACATCTATGCGGTCAAC
GATGTGGCATTCCATCCAGCCCATGGCACTCTGGCCACAGTGGGCTCAGACGGTTCATTC
TCGTTCTGGGATAAGGACGCCCGCACCAAGCTCAAATCATCTGAACTGATAGACCAGCCA
CTAACAAAGTGCGCCTTCAACCATAATGGCCAAATTTTTGCATATGCAGTGGGCTATGAT
TGGTCCAAGGGTCATGAACACTACAATCAAGCAAAGAAGACTTATATCTTCCTCCGGCCG
TGCTATGAGGACCTCAAGCCACGCTCTACTTAG
Protein sequence:
MFNQLGGANSNPNKDVEVASPPEDTVSALEFSPPSVPQTFLIAGSWDCRVRCWEVEASGK
TVLKAVQGMDGPILDVAWHDDGSKVFMASTDKSVKCWDLASNQTMQVAAHDAPVKTCHWI
KAPNYTCLMTASWDKTLKFWDTRSSVPIMTMNLTERCYCADVDYPMAVVGTADRGICIYT
LEGKPAEFKRVESPLKYQHRCIAIFKDKKTKQPTGFAVGSVEGRVAIQYVTPANPKDNFT
FKCHRSAGTTAGYQDIYAVNDVAFHPAHGTLATVGSDGSFSFWDKDARTKLKSSELIDQP
LTKCAFNHNGQIFAYAVGYDWSKGHEHYNQAKKTYIFLRPCYEDLKPRST