| Genomic Position | scaffold1231:+ 12427-25338 |
|---|---|
| See gene structure | |
| CDS Length | 909 |
| Paired RNAseq reads | 23 |
| Single RNAseq reads | 724 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007159 (9e-22) |
| Best Drosophila hit | lethal (1) G0156, isoform B (2e-12) |
| Best Human hit | isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial precursor (1e-08) |
| Best NR hit (blastp) | GJ15838 [Drosophila virilis] (2e-13) |
| Best NR hit (blastx) | GJ15838 [Drosophila virilis] (4e-13) |
| GeneOntology terms | GO:0005759 mitochondrial matrix GO:0004449 isocitrate dehydrogenase (NAD+) activity GO:0005739 mitochondrion GO:0006099 tricarboxylic acid cycle GO:0051287 NAD or NADH binding GO:0000287 magnesium ion binding GO:0055114 oxidation reduction GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR001804 Isocitrate/isopropylmalate dehydrogenase IPR006631 Protein of unknown function DM4/12 |
| Orthology group | MCL20831 |
Nucleotide sequence:
ATGTTGTTTAATGATAGAATTCTTATCTCCACAATATTTACGACCATCATCTCCTTTTTA
CCGATCGAAACTAGTTTGGAAATAACCGACAACTCACATAGAAGTCGAAGGCAGCTATTG
TTCCCGAACTCTACACTACTGCAATGCAACTTTGGCATGGCAATTCCAACTCCTGACAAG
GGCATAATTGTTAATTGGGCTATCCAGACAAACTTTCAGCTGCCGTGGAACAGGTCCCAG
ATCCCAGTGGACATATTTGAAGCCAACTCAGGATATGTTGGCACAGCAAGAAAAAAACGC
GATCTGGACTTACAGTACAGGAATAATGCTAAACTGTATCACTTTTATAAAGCCATCGAA
GATATTGTTACTGGATTTGGACATAATGGCCGAGGATGTGTGCTTCGCACCCTGTGCCAA
CTTGGAGCCGAACCACTCCATACAACGGGTGAGGACGATCTTCTTCACGAAATAGCTACA
TATGTACTCAATGAAAAATCGACCTTGACAGTTATTTCCGGTCATGCGTCGTTGTCTATC
TTGCAGTATTCTCCCCCTCCGCCTCTATACCGCGGAGTATCTCTCGTCGGCATCCCCGCG
GGCCGGGCTGGTTCCGCTCAATACAGCACGGGGGTCCGTAAGGTGACACTCATCCCTGGA
CACGGGATCGGCCCCGAGATCACGGTAGCTGTACAGAAAATATTCGAAGCCGCCAAAGTA
CCCATTGAATGGGACGAGGTGGACGTGACAGCTGTTAGAGTATTCGCTACGGTGTCTGTC
CCACTTCCAGAACCAGACACATTAGTCAGTGTGGCGTGGTTCTTTGAAGCCAATTACTAC
AACGTGGCAAACGCTTCATATTTTGACCCATTGCTTGGTGACATTGAAGTAAGTGAAATT
TGGTTCTAA
Protein sequence:
MLFNDRILISTIFTTIISFLPIETSLEITDNSHRSRRQLLFPNSTLLQCNFGMAIPTPDK
GIIVNWAIQTNFQLPWNRSQIPVDIFEANSGYVGTARKKRDLDLQYRNNAKLYHFYKAIE
DIVTGFGHNGRGCVLRTLCQLGAEPLHTTGEDDLLHEIATYVLNEKSTLTVISGHASLSI
LQYSPPPPLYRGVSLVGIPAGRAGSAQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKV
PIEWDEVDVTAVRVFATVSVPLPEPDTLVSVAWFFEANYYNVANASYFDPLLGDIEVSEI
WF