| New model in OGS2.0 | DPOGS205254 |
|---|---|
| Genomic Position | scaffold4102:- 4466-5969 |
| See gene structure | |
| CDS Length | 1338 |
| Paired RNAseq reads | 126 |
| Single RNAseq reads | 397 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001561 (6e-143) |
| Best Drosophila hit | lethal (1) G0144 (1e-37) |
| Best Human hit | protein prenyltransferase alpha subunit repeat-containing protein 1 (6e-34) |
| Best NR hit (blastp) | PREDICTED: similar to lethal (1) G0144 CG3073-PA [Tribolium castaneum] (9e-55) |
| Best NR hit (blastx) | PREDICTED: similar to lethal (1) G0144 CG3073-PA [Tribolium castaneum] (2e-57) |
| GeneOntology terms | GO:0004663 Rab geranylgeranyltransferase activity GO:0005968 Rab-protein geranylgeranyltransferase complex GO:0018346 protein amino acid prenylation |
| InterPro families | IPR002088 Protein prenyltransferase, alpha subunit IPR008940 Protein prenyltransferase |
| Orthology group | MCL13889 |
Nucleotide sequence:
ATGGATGAAGATAATTTTGCTTTGGTGGAAAAAATTATTAAAGACCTACATAATGTTCTC
GCCAAAATTCCAGATTTATATGCTTTCGACGTTGTTCCTGTGGACGTAAATTATCAAAAT
AAGTCACCGGTACTGCATTTGGAAAACTGTTTAGGGCTCGAGTCCTGGTGTGTGAAACAT
GTTTATATGTATTGTTATTCTGAGCTAATGAATAAGTTCTGTGTAAAGTCTAAAAAAATT
AATAAAAGGATATCAACAGTAGACTTTGATCGCGTTATACGACTTCTAAATGTAACATTG
CTTTTAAATCCAGAAATTAATACATTGTGGAATAAAAGGCGAGATTGGGTTTTACAATCC
TCTTTAAATAAGAATAATGAACTGCATTTCACAAGATTAATTTTATCAAGAAAACCAAAG
AGTAATGAAGCTTTTGGGTACAGACGGTGGCTTTTAAAATCAATTTTACAAGACGACCAT
CAAAACAACTCTATTGAAACACTGATAAATGACGAGCTTATAATTTGCAATTTGGCCTCC
GATAAAAGCCCCAATAACTATCACAGTTGGAATCACCGCATGTGGCTACTTAATATCTTA
AAAAATATGACACTTAACTTTGATATAAATTCTTTGTACATAAAGGAATATCATTTTTCA
GAAAAGTGGACTTCCAAACATGTTTCAGACTTTAGTTGTTTTCACTATCATGAATTCTGT
TTAAGAAATATTTATGATCTAAGCGATAAAGATTGGAAGATATTGGAAACGACATTAAAT
TCTAATTTCCGTGAAGTTTTTGTCAGATTTTTGGCATCAAATTTTCCTAAAGATTCAACT
GTTCAAGCCTCTGAGGAAAACCTTTTGATGTATTCAGAAAAAAACATTATGAGCCTCCTT
CTTGCATATTCTAATAGAAATTGTAACTGCGAAGTGAATTATGTGAAATTATGCAGAAAG
ATTGAGATTTTGTTTCATGCTTTGGTGGCCAATGATGAGTTGATACGTTTTTATAAGTAC
CATGAGACTTTATGGTATCATAGAAGATTTATCATACACGAGATCATAGTCATCATGTAC
GACCATTTTGGTTTGGTCCGTCACAATGGAGCTCTAACGAAGATGTCATGTAAAAATTGC
AATTCTGATGAATTGAGACAGAAACAGGCGAAAATTGGGAGATATGACGTCAACCGTATT
TACACCTGCATACTGTTTAATGTTGTTTTGACCCATGAGAAGAAAATCATCAATGAGAGA
CGTTTGGATGGAGACAATTATGCTGACCGCCACGAAAATTATTTGAAATTTGTTGAGGGC
CTTAATAATGTTATTTGA
Protein sequence:
MDEDNFALVEKIIKDLHNVLAKIPDLYAFDVVPVDVNYQNKSPVLHLENCLGLESWCVKH
VYMYCYSELMNKFCVKSKKINKRISTVDFDRVIRLLNVTLLLNPEINTLWNKRRDWVLQS
SLNKNNELHFTRLILSRKPKSNEAFGYRRWLLKSILQDDHQNNSIETLINDELIICNLAS
DKSPNNYHSWNHRMWLLNILKNMTLNFDINSLYIKEYHFSEKWTSKHVSDFSCFHYHEFC
LRNIYDLSDKDWKILETTLNSNFREVFVRFLASNFPKDSTVQASEENLLMYSEKNIMSLL
LAYSNRNCNCEVNYVKLCRKIEILFHALVANDELIRFYKYHETLWYHRRFIIHEIIVIMY
DHFGLVRHNGALTKMSCKNCNSDELRQKQAKIGRYDVNRIYTCILFNVVLTHEKKIINER
RLDGDNYADRHENYLKFVEGLNNVI