| New model in OGS2.0 | DPOGS211669 |
|---|---|
| Genomic Position | scaffold3206:+ 5643-11252 |
| See gene structure | |
| CDS Length | 1098 |
| Paired RNAseq reads | 761 |
| Single RNAseq reads | 2830 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001355 (6e-38) |
| Best Drosophila hit | CG14995, isoform A (6e-21) |
| Best Human hit | hypothetical protein LOC755 (4e-14) |
| Best NR hit (blastp) | PREDICTED: similar to leucine rich repeat protein [Tribolium castaneum] (9e-39) |
| Best NR hit (blastx) | GM14015 [Drosophila sechellia] (2e-20) |
| GeneOntology terms | GO:0048102 autophagic cell death GO:0035071 salivary gland cell autophagic cell death |
| InterPro families | IPR001611 Leucine-rich repeat |
| Orthology group | MCL17610 |
Nucleotide sequence:
ATGAGAGAGCTGGTTGCCCTTTCCCTGTTCCCATCCTTTCCTCTCCCTCTTCCCCAAATA
AGGCTAGCAACGCATCCACAAAACTATTTAGCGGATGTCCATGGGCGACGTATCAACAAG
ATCCGTTCTCTGGGTGACTTCGCTGGTTGCCGTCGCCTCCGGGAGCTGTACGTGAGGAAG
AATGAGATACGGGACCTGGCTGAGATCAGGCACCTGCGACACCTCCCGGACCTCACCAGC
CTCTGGCTGGATGAGAACCCCTGTACATTACACCCTGAATACCGCATGACGGTGCTCAGG
AACCTACCGAACCTTGAGAAACTGGATAACGTGGTTGTACAGCCTGATGAGGTCCAGGAG
GCGATGAGGCGCGGAGTCCACATCCCGGACTCGGACGACGAAGGCTACCCTCAGACTCAG
GAGTCGTACGGCCAATACAGGAGACAGAGGTCCTGCGAGTCCAGTCCCGAGAGGGAGCCG
GAGTACTACCGGCAGCAGCAGAGCCAACCGCCACCCAGGCACCAGCACCCGCAGGCACAC
GCGCAGGGACAGAGACACGAACACTGGGCGCAGGGTAGCGACAGCTCGGCGGAGCCCGAG
CCCGCCGTGGAGCCCGAGAGGTCGCCGCCCGCGCAGTGCCCGGCGTCGCCCGCGCGGCCC
TCGCCCGACGACGACAGGCCGGAAACGCATTACGATGTCCGCGGGCCGAGATCTCCTGAC
ACCGCGTCACTACGACATTCTATGTCCGCTCACAGTGTTAAGGACTATACTTACTCGTCC
AACGGGGAGTGGAGACAGCACGGGGGAGGGACGACGGTCACCTCGCCTCACGACCAGGAC
AGAGACAGGAGCGAGTCGTATTCTGTGAGGGAGTGGGAGCGGGACAGGGAGGCGTCCCGG
GACGGACGGGACAGGGACAGGGAGTACCCGTCCGCGGTGATGGCGGAACACAGGGGCTTC
ACCAGGAGACCGGTCGCCAGGAACTCCAACCTCCTGTCAGCGGTGCTGTGCCTCGTCAAG
GAGCTGGACTACCCCAGCCTGGAGGTGGCCGAGATGGCTGTCAGATGTCGCATGGACGAG
CTCGCGAATAGCCAGTGA
Protein sequence:
MRELVALSLFPSFPLPLPQIRLATHPQNYLADVHGRRINKIRSLGDFAGCRRLRELYVRK
NEIRDLAEIRHLRHLPDLTSLWLDENPCTLHPEYRMTVLRNLPNLEKLDNVVVQPDEVQE
AMRRGVHIPDSDDEGYPQTQESYGQYRRQRSCESSPEREPEYYRQQQSQPPPRHQHPQAH
AQGQRHEHWAQGSDSSAEPEPAVEPERSPPAQCPASPARPSPDDDRPETHYDVRGPRSPD
TASLRHSMSAHSVKDYTYSSNGEWRQHGGGTTVTSPHDQDRDRSESYSVREWERDREASR
DGRDRDREYPSAVMAEHRGFTRRPVARNSNLLSAVLCLVKELDYPSLEVAEMAVRCRMDE
LANSQ