| New model in OGS2.0 | DPOGS212118 |
|---|---|
| Genomic Position | scaffold677:- 79506-81577 |
| See gene structure | |
| CDS Length | 1389 |
| Paired RNAseq reads | 1053 |
| Single RNAseq reads | 3161 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006749 (0.0) |
| Best Drosophila hit | elongation factor Tu mitochondrial, isoform B (0.0) |
| Best Human hit | elongation factor Tu, mitochondrial precursor (5e-142) |
| Best NR hit (blastp) | elongation factor Tu [Bombyx mori] (0.0) |
| Best NR hit (blastx) | elongation factor Tu [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003746 translation elongation factor activity GO:0006414 translational elongation GO:0005739 mitochondrion GO:0005525 GTP binding GO:0003924 GTPase activity |
| InterPro families | IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle IPR005225 Small GTP-binding protein IPR000795 Protein synthesis factor, GTP-binding IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR004160 Translation elongation factor EFTu/EF1A, C-terminal IPR004161 Translation elongation factor EFTu/EF1A, domain 2 |
| Orthology group | MCL11461 |
Nucleotide sequence:
ATGGCGACTATATCATTTGCTAAAAGTTGGGTTAACCCCGCTCTTAAATTAGTTTTAAAA
CAGAGCCAATGTTCTCATTTACGATGCACAAGTGTACCATCGCTAACACCTCTAAGTATT
GTACTTCGTAGAAACTATGCCGAGAAGGTGGTGTTTGAACGCACCAAGCCTCATTGTAAT
GTAGGCACTATTGGGCATGTTGACCACGGGAAAACAACACTCACCGCAGCCATCACCAAA
GTATTAGCTGACCTTAATTTAGCTCAAAAGAAAGGGTACTCAGATATTGACAATGCTCCT
GAAGAGAAGGCTCGAGGTATTACCATCAATGTAGCTCATGTTGAATATCAAACGGAGACA
CGGCACTATGGACACACTGATTGTCCAGGTCACGCTGATTACATTAAGAACATGATAACT
GGGACAGCACAGATGGATGGAGCAATTCTGGTTGTAGCTGCTACAGACGGAGTCATGCCA
CAAACAAGGGAACATTTGTTATTGGCAAAGCAAATTGGCATACAACATATAGTTGTTTTC
ATTAATAAAGTCGATGCTGCTGATCAGGAAATGGTTGAATTAGTAGAAATGGAGATTCGT
GAACTCATGACTGAAATGGGATATGACGGAGACAATGTTCCAGTCATCAAAGGCTCTGCT
CTATGTGCATTGGAAGGCAAAAAACCTGAAATTGGTTCAGAAGCCATTAGTAAACTATTG
CAAGAAGTCGATTCATTTATCCCAACCCCTGTAAGGGAATTAGACAAGCCATTCCTGTTG
CCTGTTGAATCAGTACACTCAATTCCTGGTAGAGGAACTGTTGTCACTGGCCGTTTATAC
AGGGGTAATAAAGGAACTGAATGTGAAATAGTTGGTCATGGAAAAGTAATGAAAACAACT
GTTACTGGTGTAGAGATGTTCCACAAAACATTAGAAGAGGCACAGGCTGGTGACCAACTC
GGTGCTTTAGTCAGATCAATCAAAAGGGAACAGATCAAACGTGGTATGGTTATGGCTAAG
CCTGGAACTGTAAAAGCACATGACAGCTTGGAAGCAGCCGTATACATATTGAGTAAAGAT
GAAGGCGGTCGTTCAAAACCCTTTACATCATTTATCCAGTTGCAAATGTTTTCTATGACT
TGGGATTGTGCTGCACAAGTTACAGTCCCTGATAAGGAGATGGTTATGCCTGGAGAAGAT
GCCACATTACAACTCAAATTGTTGAAACCTATGGTCTGTGAACCGGGACAAAGATTCACT
TTGCGTCTTGGAGATTTAACTCTAGGGACTGGTGTTATTACTAAAGTGAACAAAAATCTC
TCCGAAGAAGACAGACTGAAACTTATGGAAGGAAAGAAAGCAAGAGAGAAGGCTGCTGCA
AAGAAGTGA
Protein sequence:
MATISFAKSWVNPALKLVLKQSQCSHLRCTSVPSLTPLSIVLRRNYAEKVVFERTKPHCN
VGTIGHVDHGKTTLTAAITKVLADLNLAQKKGYSDIDNAPEEKARGITINVAHVEYQTET
RHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHIVVF
INKVDAADQEMVELVEMEIRELMTEMGYDGDNVPVIKGSALCALEGKKPEIGSEAISKLL
QEVDSFIPTPVRELDKPFLLPVESVHSIPGRGTVVTGRLYRGNKGTECEIVGHGKVMKTT
VTGVEMFHKTLEEAQAGDQLGALVRSIKREQIKRGMVMAKPGTVKAHDSLEAAVYILSKD
EGGRSKPFTSFIQLQMFSMTWDCAAQVTVPDKEMVMPGEDATLQLKLLKPMVCEPGQRFT
LRLGDLTLGTGVITKVNKNLSEEDRLKLMEGKKAREKAAAKK