| New model in OGS2.0 | DPOGS212121 |
|---|---|
| Genomic Position | scaffold677:- 36567-37556 |
| See gene structure | |
| CDS Length | 354 |
| Paired RNAseq reads | 90 |
| Single RNAseq reads | 517 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006752 (2e-61) |
| Best Drosophila hit | Rpb11 (6e-54) |
| Best Human hit | DNA-directed RNA polymerase II subunit RPB11-a (5e-46) |
| Best NR hit (blastp) | PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa polypeptide [Tribolium castaneum] (3e-55) |
| Best NR hit (blastx) | PREDICTED: similar to DNA-directed RNA polymerase II 13.3 kDa polypeptide [Tribolium castaneum] (6e-54) |
| GeneOntology terms | GO:0006366 transcription from RNA polymerase II promoter GO:0005665 DNA-directed RNA polymerase II, core complex GO:0003899 DNA-directed RNA polymerase activity GO:0005634 nucleus GO:0006350 transcription GO:0003677 DNA binding GO:0046983 protein dimerization activity |
| InterPro families | IPR008193 DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site IPR009025 DNA-directed RNA polymerase, RBP11-like IPR011261 DNA-directed RNA polymerase, dimerisation |
| Orthology group | MCL12409 |
Nucleotide sequence:
ATGAACGCACCACCGACATTCGAATCATTTTTACTGTATGATGGAGAAAAGAAGGTTCAG
AAAGAAGAAGATACAAAAGTTACAAATGCGGCTATATTTACTGTTAATAAGGAGGACCAT
TCGCTTGGAAACATGATCAGACACCAACTTTTAAAGGACCCGAAAGTATTATTTGCAGGC
TATAAAGTACCACATCCTTTAGAACATAAATTTGTTTTGCGTATTCAAACAACTTCGGAC
TATACACCTCAAGATGCCTTTATGAATGCCATAACAGATTTAACATCTGAGTTATCTTTG
TTTGAAGAACGATTTAAGGAAGCAATTAAAGAAAAGAAAGATGGCTTGGACTGA
Protein sequence:
MNAPPTFESFLLYDGEKKVQKEEDTKVTNAAIFTVNKEDHSLGNMIRHQLLKDPKVLFAG
YKVPHPLEHKFVLRIQTTSDYTPQDAFMNAITDLTSELSLFEERFKEAIKEKKDGLD