| New model in OGS2.0 | DPOGS213729 |
|---|---|
| Genomic Position | scaffold5918:- 4346-6833 |
| See gene structure | |
| CDS Length | 1104 |
| Paired RNAseq reads | 202 |
| Single RNAseq reads | 505 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011486 (2e-71) |
| Best Drosophila hit | CG5621, isoform B (5e-69) |
| Best Human hit | glutamate receptor, ionotropic kainate 5 precursor (1e-58) |
| Best NR hit (blastp) | glutamate receptor, ionotropic kainate 2 precursor, putative [Pediculus humanus corporis] (5e-81) |
| Best NR hit (blastx) | glutamate receptor, ionotropic kainate 2 precursor, putative [Pediculus humanus corporis] (5e-78) |
| GeneOntology terms | GO:0015277 kainate selective glutamate receptor activity GO:0006811 ion transport GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane |
| InterPro families | IPR001508 NMDA receptor IPR001320 Ionotropic glutamate receptor IPR001638 Extracellular solute-binding protein, family 3 |
| Orthology group | ND |
Nucleotide sequence:
ATGATATTCGTGGGCCGCATTTCTCACAAGGAGTGGCAGAACCCGGTACCGTGTATAGAA
CAACCAGAGGAATTGAGCAACCAGTTCAGTTTTTCTAACTCGGTGTGGCTTATCATTGGA
TCGGTTATGCAACAAGGCACAGAAATCGCACCCATTGCTCTAGCACCTCGAATAATAACA
AGTGTGTGGTGGTTTTTTACGATGGTCATGGTAGCTTCTTACGTGGGAACCTTGGTAGCC
TTCCTCACTGTGGAGAAGAATGTTCTTCCTTTCACTACAGTTGAGGAATTACATGCCCAC
AAATCAATATCATACGGATGTAAAAGCAAAGGTTCTACAAAACAATTCTTTCAGACCTCA
TCAAATCCGATGTATCAAGATATGTATGCAAAAATGCAAGCTAAAAATTGGCTCGTCACA
GATAATAATATTGGAGTGGAACTGGCTGAAAACTCGACGTATGCATTTTTTATGGAATCT
ACATCCATAGAGTATTACAAAGAGAGGCATTGTGATTTACTCCAAGTCGGAGGACTTCTT
GATTCAAAAAGTTATGGCATTGGAATGAAAAAAGGTTCGAAATACAAAAAGCACATTGAC
GATGCATTACTTCAGCTTAAGGAGAGAGGTGAAATACAAAAGCTAAAAGACATTTGGTGG
AAACAAAAACACGACGGGGGAAAGTGTGGGACAAAGACGGACGAAGATCCTAAGCAATTG
GGTATGAAAAATATGTTGGGAGCGTTCGTAGTACTCGGCGTGGGCTCATTGATTGGCGTT
TTTGTATCAACCCTGGACATGATGTGGGGAGTTTTCAAGCGCTCGGTTAAATATAATACA
ACATTTAAATATGAATTAATAGAGGAGCTTAAATTTGCTCTTACTTTTAACGGAGATATA
AAACCAGTGAAACGTCCGACAAAAGAAAGCGATGGCAGCTTCGAAGCACTCGCGGAATTG
GAAGCGAAAGATGAGATCAAATCCCTTCACTCTATCAAATCTGGGAGGTCCACTGACACT
CATCATACCCATCACTCGCACGGATCAAGGCACTCATCCGGTGGTTTGAGTGTGGCTTTT
GCTAGACGACGGGAATATACTTGA
Protein sequence:
MIFVGRISHKEWQNPVPCIEQPEELSNQFSFSNSVWLIIGSVMQQGTEIAPIALAPRIIT
SVWWFFTMVMVASYVGTLVAFLTVEKNVLPFTTVEELHAHKSISYGCKSKGSTKQFFQTS
SNPMYQDMYAKMQAKNWLVTDNNIGVELAENSTYAFFMESTSIEYYKERHCDLLQVGGLL
DSKSYGIGMKKGSKYKKHIDDALLQLKERGEIQKLKDIWWKQKHDGGKCGTKTDEDPKQL
GMKNMLGAFVVLGVGSLIGVFVSTLDMMWGVFKRSVKYNTTFKYELIEELKFALTFNGDI
KPVKRPTKESDGSFEALAELEAKDEIKSLHSIKSGRSTDTHHTHHSHGSRHSSGGLSVAF
ARRREYT