Monarch geneset OGS2.0

DPOGS213729
TranscriptDPOGS213729-TA3477 bp
ProteinDPOGS213729-PA1158 aa
Genomic positionDPSCF300278 - 76357-84971
RNAseq coverage65x (Rank: top 67%)
Annotation
HeliconiusHMEL0223910.062.01% 
BombyxBGIBMGA011527-TA0.056.21% 
DrosophilaCG3822-PA2e-15638.40% 
EBI UniRef50UniRef50_F5HKL24e-17240.70%AGAP002797-PB n=3 Tax=Neoptera RepID=F5HKL2_ANOGA
NCBI RefSeqXP_312117.42e-17341.71%AGAP002797-PA [Anopheles gambiae str. PEST]
NCBI nr blastpgi|3479685781e-17140.70%AGAP002797-PB [Anopheles gambiae str. PEST]
NCBI nr blastxgi|1571296951e-16641.27%ionotropic glutamate receptor subunit ia [Aedes aegypti]
Group
Gene OntologyGO:00160203.8e-61membrane
GO:00049703.8e-61ionotropic glutamate receptor activity
GO:00052343.8e-61extracellular-glutamate-gated ion channel activity
GO:00068105.5e-28transport
GO:00302885.5e-28outer membrane-bounded periplasmic space
GO:00052155.5e-28transporter activity
GO:00048726.3e-08receptor activity
GO:00068116.3e-08ion transport
GO:00052166.3e-08ion channel activity
KEGG pathwayhsa:28997e-126 
 K05203 (GRIK3)maps-> Neuroactive ligand-receptor interaction
InterPro domain[406-768] IPR0013203.8e-61Ionotropic glutamate receptor
[405-766] IPR0016385.5e-28Extracellular solute-binding protein, family 3
[67-364] IPR0018288.2e-26Extracellular ligand-binding receptor
[413-476] IPR0195943e-16Glutamate receptor, L-glutamate/glycine-binding
[849-876] IPR0015086.3e-08NMDA receptor
Orthology groupMCL25863 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213729-TA
ATGAGTGAAATGTTTTTGAGAGTTTTCGTCTTGGTGACGGTGGTGATAAAATGTGTCGCAACACAACAGCCGGTTATTGGGGGTTTATTTTACAGCGATGACGAGGATCTACAAATGGCGCTCACTGTGAGCGCTAAAATGTCCAACTTCACCACATCAATACGCACTGTGTCTAAAAGGGGAGAGATGATTGAAATATCTAATCATATCTGTTCCCTTGTCGAAGAAGGCATATTTGCCATTATTGAAGGTCTTGGAGGAAAAGCGACAGAACTAGTTCAATCTCTTTGCGATATTCTGGAGATACCTCTCATTGTTTTGGAAGATAATGACTATTTCGCGAGAACCTGGTCCCTAGTGAATCTGTTTCCGAGCCCCGTTGCTTTCAACATGGCTCTGGAAAATTTGATTTTAATGAAGAATTGGCGAAACTTTACTATTCTTTACGTCAAAGGCCACAGTCTAACTAAAGTGCATAGTTTAATGAAAATGGGTTATCCTACTGACAAATTTACTGTTACTATCAGAGAACTAAATGGCACAGATTATAGAGACACTTTAATAAGTTGTAGAAAAAGCGGCCAAGTTAATTTCGTTGTGGACTGTCCATCAGCAAACTTGGAACAAATTCTGCAGCAAGCCCAACAAGTTGGTCTAATGGCAGACGAACATTCATACATATTTGTGTCCCCGGATTTATTCACTATCAATTTAGACCGTTACCGATATGGCGGAGTCAATATGACTGGTTTTAGACTCATTGATTTGTCAAAAAATGAGTTTCTATGGGATTACGTGACGAATTACAACACGGAGTCAGGTTTTAATGTCGAACCATATGAACTTAAGGCTAAATCTATTCTCATCCGTGATGCGATCCTTGTGATCTCTGACGCCTTGTCGAAACTCAACCAGAACAACTTATTTCCGAAACTTGAATCGCAAAGTCTCAGCTGCGAAAACTACGAGTCTTGGCAGTTTGGGTCCACCTTGATCAACTTTATGAAGACGAATAAAATAGAAGGTGTCACGAGAACTTTAATATTTGATGGATTCGGACAAAGGAACGATGTTATTATGGACATATTAGAGCTAACGCCGGCTGGAAATCAAACAATTGGTAATTGGAGTAGTGAGGGGCTTATTCTCGACAGACCGTTTGTGCCGGCAGCTGAAATAGTCGAGGAAACGATAATGAGAAATAAAACATTCAAAGTTCTTATATCTACGACAGCTCCTTACGGTTACATTAAGAACTCAGATAAACGATTGGAGGGTAATGACAGATACGAAGGGTTCACAATAGATTTAATAGAAAAACTCTCTGAAATGTTGGGTTTCAACTATGAATTTGAAATTGAATCTGACTACGGGACCATAGATTCTGTTACACATAAGTGGACAGGGATGGTGCCGAAACTTAGAGAAGAGAAAGCCGATTTCGCGATTTGTGATTTTACAATCACAGCGGAGAGACAGAACGAAATTGACTTCTCAACCCCTTTTATGACTCTCGGCATTGGTATACTTTATAAAGAACCAAGTAAACAACCGCCCGAAATGTTTTCCTTTATGGCTGTATTTTCTAAAGAGGTCTGGTACTATATGATGCTGGTTCAGGCTGGGCTTGGAGTTATCATGATATTCGTGGGCCGCATTTCTCACAAGGAGTGGCAGAACCCGGTACCGTGTATAGAACAACCAGAGGAATTGAGCAACCAGTTCAGTTTTTCTAACTCGGTGTGGCTTATCATTGGATCGGTTATGCAACAAGGCACAGAAATCGCACCCATTGCTCTAGCACCTCGAATAATAACAAGTGTGTGGTGGTTTTTTACGATGGTCATGGTAGCTTCTTACGTGGGAACCTTGGTAGCCTTCCTCACTGTGGAGAAGAATGTTCTTCCTTTCACTACAGTTGAGGAATTACATGCCCACAAATCAATATCATACGGATGTAAAAGCAAAGGTTCTACAAAACAATTCTTTCAGACCTCATCAAATCCGATGTATCAAGATATGTATGCAAAAATGCAAGCTAAAAATTGGCTCGTCACAGATAATAATATTGGAGTGGAACTGGCTGAAAACTCGACGTATGCATTTTTTATGGAATCTACATCTATAGAGTATTACAAAGAGAGGCATTGTGATTTACTTCAAGTCGGAGGGCTTCTTGATTCAAAAAGTTATGGCATTGGGATGAAAAAAGGTTCGAAATACAAAAAGCACATTGACGATGCATTACTTCAGCTTAAGGAGAGAGGTGAAATACAAAAGCTAAAAGACATTTGGTGGAAACAAAAACACGACGGGGGAAAGTGTGGGGTCTGGTACTATATGATGCTGGTTCAGGCTGGGCTTGGAGTTATCATGATATTCGTGGGCCGCATTTCTCACAAGGAGTGGCAGAACCCGGTACCGTGTATAGAACAACCAGAGGAATTGAGCAACCAGTTCAGTTTTTCTAACTCGGTGTGGCTTATCATTGGATCGGTTATGCAACAAGGCACAGAAATCGCACCCATTGCTCTAGCACCTCGAATAATAACAAGTGTGTGGTGGTTTTTTACGATGGTCATGGTAGCTTCTTACGTGGGAACCTTGGTAGCCTTCCTCACTGTGGAGAAGAATGTTCTTCCTTTCACTACAGTTGAGGAATTACATGCCCACAAATCAATATCATACGGATGTAAAAGCAAAGGTTCTACAAAACAATTCTTTCAGACCTCATCAAATCCGATGTATCAAGATATGTATGCAAAAATGCAAGCTAAAAATTGGCTCGTCACAGATAATAATATTGGAGTGGAACTGGCTGAAAACTCGACGTATGCATTTTTTATGGAATCTACATCCATAGAGTATTACAAAGAGAGGCATTGTGATTTACTCCAAGTCGGAGGACTTCTTGATTCAAAAAGTTATGGCATTGGAATGAAAAAAGGTTCGAAATACAAAAAGCACATTGACGATGCATTACTTCAGCTTAAGGAGAGAGGTGAAATACAAAAGCTAAAAGACATTTGGTGGAAACAAAAACACGACGGGGGAAAGTGTGGGACAAAGACGGACGAAGATCCTAAGCAATTGGGTATGAAAAATATGTTGGGAGCGTTCGTAGTACTCGGCGTGGGCTCATTGATTGGCGTTTTTGTATCAACCCTGGACATGATGTGGGGAGTTTTCAAGCGCTCGGTTAAATATAATACAACATTTAAATATGAATTAATAGAGGAGCTTAAATTTGCTCTTACTTTTAACGGAGATATAAAACCAGTGAAACGTCCGACAAAAGAAAGCGATGGCAGCTTCGAAGCACTCGCGGAATTGGAAGCGAAAGATGAGATCAAATCCCTTCACTCTATCAAATCTGGGAGGTCCACTGACACTCATCATACCCATCACTCGCACGGATCAAGGCACTCATCCGGTGGTTTGAGTGTGGCTTTTGCTAGACGACGGGAATATACTTGA

Protein sequence:

>DPOGS213729-PA
MSEMFLRVFVLVTVVIKCVATQQPVIGGLFYSDDEDLQMALTVSAKMSNFTTSIRTVSKRGEMIEISNHICSLVEEGIFAIIEGLGGKATELVQSLCDILEIPLIVLEDNDYFARTWSLVNLFPSPVAFNMALENLILMKNWRNFTILYVKGHSLTKVHSLMKMGYPTDKFTVTIRELNGTDYRDTLISCRKSGQVNFVVDCPSANLEQILQQAQQVGLMADEHSYIFVSPDLFTINLDRYRYGGVNMTGFRLIDLSKNEFLWDYVTNYNTESGFNVEPYELKAKSILIRDAILVISDALSKLNQNNLFPKLESQSLSCENYESWQFGSTLINFMKTNKIEGVTRTLIFDGFGQRNDVIMDILELTPAGNQTIGNWSSEGLILDRPFVPAAEIVEETIMRNKTFKVLISTTAPYGYIKNSDKRLEGNDRYEGFTIDLIEKLSEMLGFNYEFEIESDYGTIDSVTHKWTGMVPKLREEKADFAICDFTITAERQNEIDFSTPFMTLGIGILYKEPSKQPPEMFSFMAVFSKEVWYYMMLVQAGLGVIMIFVGRISHKEWQNPVPCIEQPEELSNQFSFSNSVWLIIGSVMQQGTEIAPIALAPRIITSVWWFFTMVMVASYVGTLVAFLTVEKNVLPFTTVEELHAHKSISYGCKSKGSTKQFFQTSSNPMYQDMYAKMQAKNWLVTDNNIGVELAENSTYAFFMESTSIEYYKERHCDLLQVGGLLDSKSYGIGMKKGSKYKKHIDDALLQLKERGEIQKLKDIWWKQKHDGGKCGVWYYMMLVQAGLGVIMIFVGRISHKEWQNPVPCIEQPEELSNQFSFSNSVWLIIGSVMQQGTEIAPIALAPRIITSVWWFFTMVMVASYVGTLVAFLTVEKNVLPFTTVEELHAHKSISYGCKSKGSTKQFFQTSSNPMYQDMYAKMQAKNWLVTDNNIGVELAENSTYAFFMESTSIEYYKERHCDLLQVGGLLDSKSYGIGMKKGSKYKKHIDDALLQLKERGEIQKLKDIWWKQKHDGGKCGTKTDEDPKQLGMKNMLGAFVVLGVGSLIGVFVSTLDMMWGVFKRSVKYNTTFKYELIEELKFALTFNGDIKPVKRPTKESDGSFEALAELEAKDEIKSLHSIKSGRSTDTHHTHHSHGSRHSSGGLSVAFARRREYT-