| New model in OGS2.0 | DPOGS204668 |
|---|---|
| Genomic Position | scaffold9191:- 2553-4662 |
| See gene structure | |
| CDS Length | 483 |
| Paired RNAseq reads | 3840 |
| Single RNAseq reads | 16805 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007469 (9e-87) |
| Best Drosophila hit | eIF-5A, isoform A (4e-70) |
| Best Human hit | eukaryotic translation initiation factor 5A-1 isoform B (3e-58) |
| Best NR hit (blastp) | eukaryotic initiation factor 5A [Papilio xuthus] (2e-88) |
| Best NR hit (blastx) | eukaryotic initiation factor 5A [Papilio xuthus] (4e-89) |
| GeneOntology terms | GO:0006413 translational initiation GO:0045182 translation regulator activity GO:0005829 cytosol GO:0003743 translation initiation factor activity GO:0048102 autophagic cell death GO:0035071 salivary gland cell autophagic cell death GO:0045901 positive regulation of translational elongation GO:0006452 translational frameshifting GO:0003723 RNA binding GO:0003746 translation elongation factor activity GO:0043022 ribosome binding GO:0045905 positive regulation of translational termination GO:0008612 peptidyl-lysine modification to hypusine |
| InterPro families | IPR001884 Translation elongation factor IF5A IPR008991 Translation protein SH3-like IPR016027 Nucleic acid-binding, OB-fold-like IPR020189 Translation elongation factor, IF5A C-terminal IPR005824 KOW IPR014722 Translation protein SH3-like, subgroup IPR012340 Nucleic acid-binding, OB-fold IPR019769 Translation elongation factor, IF5A, hypusine site |
| Orthology group | MCL11895 |
Nucleotide sequence:
ATGGGCGACATTGAAGACACACATTTTGAGACCGGGGACTCCGGTGCCTCAGCCACCTTC
CCCATGCAATGCTCGGCCCTCCGCAAGAACGGGTTCGTGATGCTGAAAGGTCGCCCCTGC
AAGATTGTAGAGATGTCCACCTCCAAGACCGGAAAACATGGTCACGCTAAAGTGCACTTG
GTCGGCATAGATATATTCAATGGAAAGAAGTACGAGGACATCTGTCCGTCCACTCACAAC
ATGGACGTGCCTCACGTCAAGCGCGAGGACTACCAGCTGACTGACATCTCCGACGACGGC
TACCTCACATTGATGGCGGACAACGGGGACCTGCGCGAGGACCTCAAGATACCGGACGGA
GACCTGGGCCTCCAGCTGAGGTCCGACTTCGACAGCGGCAAGGAACTGCTGTGCACCGTT
CTGAAGTCTTGCGGCGAGGAGTGTGTGATCGCGGTGAAGGCAAACACGGCTCTCGACAAA
TAA
Protein sequence:
MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL
VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDG
DLGLQLRSDFDSGKELLCTVLKSCGEECVIAVKANTALDK