| DPOGS204668 | ||
|---|---|---|
| Transcript | DPOGS204668-TA | 483 bp |
| Protein | DPOGS204668-PA | 160 aa |
| Genomic position | DPSCF300170 - 297789-299898 | |
| RNAseq coverage | 14723x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016252 | 7e-91 | 99.38% | |
| Bombyx | BGIBMGA007469-TA | 1e-90 | 98.75% | |
| Drosophila | eIF-5A-PA | 3e-74 | 80.62% | |
| EBI UniRef50 | UniRef50_Q9GU68 | 3e-72 | 80.62% | Eukaryotic translation initiation factor 5A n=99 Tax=Eukaryota RepID=IF5A_DROME |
| NCBI RefSeq | NP_001037538.1 | 4e-89 | 98.75% | translation initiation factor 5A [Bombyx mori] |
| NCBI nr blastp | gi|183979235 | 3e-88 | 99.38% | eukaryotic initiation factor 5A [Papilio xuthus] |
| NCBI nr blastx | gi|183979235 | 6e-89 | 99.38% | eukaryotic initiation factor 5A [Papilio xuthus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0043022 | 9.2e-116 | ribosome binding | |
| GO:0003723 | 9.2e-116 | RNA binding | ||
| GO:0006452 | 9.2e-116 | translational frameshifting | ||
| GO:0003746 | 9.2e-116 | translation elongation factor activity | ||
| GO:0045905 | 9.2e-116 | positive regulation of translational termination | ||
| GO:0008612 | 9.2e-116 | peptidyl-lysine modification to hypusine | ||
| GO:0045901 | 9.2e-116 | positive regulation of translational elongation | ||
| KEGG pathway | ||||
| InterPro domain | [3-156] IPR001884 | 9.2e-116 | Translation elongation factor IF5A | |
| [14-89] IPR014722 | 3.8e-43 | Translation protein SH3-like, subgroup | ||
| [14-93] IPR008991 | 1.6e-29 | Translation protein SH3-like | ||
| [90-153] IPR012340 | 4.1e-28 | Nucleic acid-binding, OB-fold | ||
| [85-153] IPR020189 | 5.1e-27 | Translation elongation factor, IF5A C-terminal | ||
| [86-157] IPR016027 | 6.3e-25 | Nucleic acid-binding, OB-fold-like | ||
| Orthology group | MCL13035 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS204668-TA
ATGGGCGACATTGAAGACACACATTTTGAGACCGGGGACTCCGGTGCCTCAGCCACCTTCCCCATGCAATGCTCGGCCCTCCGCAAGAACGGGTTCGTGATGCTGAAAGGTCGCCCCTGCAAGATTGTAGAGATGTCCACCTCCAAGACCGGAAAACATGGTCACGCTAAAGTGCACTTGGTCGGCATAGATATATTCAATGGAAAGAAGTACGAGGACATCTGTCCGTCCACTCACAACATGGACGTGCCTCACGTCAAGCGCGAGGACTACCAGCTGACTGACATCTCCGACGACGGCTACCTCACATTGATGGCGGACAACGGGGACCTGCGCGAGGACCTCAAGATACCGGACGGAGACCTGGGCCTCCAGCTGAGGTCCGACTTCGACAGCGGCAAGGAACTGCTGTGCACCGTTCTGAAGTCTTGCGGCGAGGAGTGTGTGATCGCGGTGAAGGCAAACACGGCTCTCGACAAATAA
>DPOGS204668-PA
MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGLQLRSDFDSGKELLCTVLKSCGEECVIAVKANTALDK-