| New model in OGS2.0 | DPOGS206355 |
|---|---|
| Genomic Position | scaffold4250:+ 6309-9218 |
| See gene structure | |
| CDS Length | 1074 |
| Paired RNAseq reads | 276 |
| Single RNAseq reads | 792 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014111 (3e-127) |
| Best Drosophila hit | ND |
| Best Human hit | calpain-7 (7e-63) |
| Best NR hit (blastp) | PREDICTED: similar to calpain [Tribolium castaneum] (5e-81) |
| Best NR hit (blastx) | PREDICTED: similar to calpain [Tribolium castaneum] (1e-77) |
| GeneOntology terms | GO:0008234 cysteine-type peptidase activity GO:0008233 peptidase activity GO:0005634 nucleus GO:0006508 proteolysis GO:0005622 intracellular GO:0004198 calcium-dependent cysteine-type endopeptidase activity |
| InterPro families | IPR001300 Peptidase C2, calpain, catalytic domain IPR007330 MIT |
| Orthology group | ND |
Nucleotide sequence:
ATGAGTGATTTCGTTAACGCAACGGAAGCAGCGTCTCTGGCTGTGCAGTTTGATCAAACA
GGCCAGACTGATAAAGCAGTAGAATGTTACCGGACTGCTGCAAGATTGTTGGATCGTGTG
TGTCATCAAGTTTCTTCAGAGAAGCAAATAGAATTCCGACGTAAAGTAAAAGAATACTTA
GAGCGGGCTACACGCCTACAGGAGCAGAAAGATGGAGCCCAACAAGAGGAAAGTATAAGA
AATCTACAAAAATGTTATTTTCTGATGCAGCAAGCGTTAGACGCAGATGAGGCCAATTTG
AAGGATTTAGCTCTGCAATTATACACACAGGCAGTAGAGTTGGCTGTCAGTGTTAAATCA
AGTGACCCTGATGTAATGACAAAGGTGAAAGGTTTAGCAGCACAAGCTCTGGATAGAGCC
GAAGAGATTAAAGGTATCAAGAAAATGGGGGCTTTGTCGATTACACCAGGTATAACATCA
GGTGTATCACCAAATCGTGTTCATCTCCAACGAGAACAGAGTGTCCATTTAAAAGTGAGT
GGAAAACAAGTGTACACGGAAGAGGAAAAGGAAGTACTGCGAACGACATCCAACATCAAC
AACAACTGTTTCCTTCCGTTTATGGAGGTGGATTTGTCAGAGAAATTCCAATATGCATTG
CCGTTTGAAGACAGAGCCAGCGAATTGAAACTGTCATCGAAACAGGCTAAGGAGTTCCAG
TGCTGGGTTCGGCCTCATGAAGTATCAAGTGATCCCAAGATGATCGCTGGTGATGACCTC
GATTTCTTCAGCATCAAACAGACTATAGTATCAGATTGTTCGTTCGTGGCGTCGTTAGCT
GTAAGTGCCTTGTACGAAAGGAGGTTCAATAAGAAGATAATAACCTCAATAATATACCCA
AAGAATAAGAACAAACAGCCCGTGTACAATCCCTTCGGCAAGTACATGGTTAAGCTGCAC
TTAAATGGTGTCAGGAGAAAGGTGAGTCTAACCTTTATATACATTTTTTTGGTTTTTAAA
ACTAAAAATGTTGCTCAAAGACAATTTTTTTTTGTCTATGGTTTGGGATCATAG
Protein sequence:
MSDFVNATEAASLAVQFDQTGQTDKAVECYRTAARLLDRVCHQVSSEKQIEFRRKVKEYL
ERATRLQEQKDGAQQEESIRNLQKCYFLMQQALDADEANLKDLALQLYTQAVELAVSVKS
SDPDVMTKVKGLAAQALDRAEEIKGIKKMGALSITPGITSGVSPNRVHLQREQSVHLKVS
GKQVYTEEEKEVLRTTSNINNNCFLPFMEVDLSEKFQYALPFEDRASELKLSSKQAKEFQ
CWVRPHEVSSDPKMIAGDDLDFFSIKQTIVSDCSFVASLAVSALYERRFNKKIITSIIYP
KNKNKQPVYNPFGKYMVKLHLNGVRRKVSLTFIYIFLVFKTKNVAQRQFFFVYGLGS