| New model in OGS2.0 | DPOGS202001 |
|---|---|
| Genomic Position | scaffold79:+ 126308-157137 |
| See gene structure | |
| CDS Length | 1236 |
| Paired RNAseq reads | 1344 |
| Single RNAseq reads | 3583 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010407 (1e-93) |
| Best Drosophila hit | headcase, isoform C (3e-84) |
| Best Human hit | headcase protein homolog (5e-37) |
| Best NR hit (blastp) | PREDICTED: similar to Headcase protein [Tribolium castaneum] (6e-134) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (1e-88) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0007430 terminal branching, open tracheal system GO:0035155 negative regulation of terminal cell fate specification, open tracheal system GO:0030154 cell differentiation GO:0007424 open tracheal system development GO:0003674 molecular_function GO:0035147 branch fusion, open tracheal system GO:0016246 RNA interference GO:0048676 axon extension involved in development |
| InterPro families | ND |
| Orthology group | MCL13753 |
Nucleotide sequence:
ATGGCTCCACGACGACAAGGCGCCACCGGGGAACGGGAGTCGGAGGACGCTCACGGCTGT
TGTGTACCCGGAGAATGTCTCAGACCTCGAGAACCTGTGCGTGTTGAGGACGCAATTCGC
GTACTATGCAACAATGACACGTGCGCCGCCGGCCGATACATGCACAGAGAATGCTTCGAG
CAATGGGAAGCCGGGGTACTCGCTTATCTGAAATCGTGCGGCCGCGCCAGGTCCTGGTCA
GAGAGGCAAAGACATCAAAATCTATGGACGAAGAAGGGCTACGATCTAGCATTTAAGGCC
TGCGGTTGCCGATGTGGGCGAGGACATTTAAAGAAAGATCTCGATTGGATTCCACCGGGA
ACAGCTATCAGGGCCGAGGAAGAGAAGAAGAAGCGTAGGCGAGCTCGTCCTGGCAGGACT
CCGGCGGCGGTAGACACGCGCTCAAGGGCGTTCAGTCTTTCAAGTTCAGGGTCATGCTCG
CCGCCATCCGCACCTTCGGAGCCATCGACAAGCCCGACACACGCTCCACCACACTCGCTG
ACACCAGCCAAGAGGAACTCTAAGCCCGAAATAGTATCCGACAGAGTTAGGGCGGGTGCT
GGCGCGAATGGCATATTTTCAAGACGACTAGACTTCTCCACATTCAACCTGCTCCCCAAA
TATAAAGTCAACTCGTATCAGATCAAGATTGAGGATGAAGGCAACCATGGCAACGATGAC
ACACGTTTGTTCATTCTATCCACCTTGGCTGGACAGCACAAGCCCCGTGTATCATGTGCG
TTGTGCAAGGAAACCCTCCACGTCTTCGACCGGTATCCTTTAGTGGATGGCACATTCTTC
CTTAGCCCTCGACAGCATACCAGCAGTGCTGTTGAGGTAAAAGTGGAAGGACGTACGCAA
TTTTTAACTTGCGTATGCATGGGATGCCTAGAGCGATGTGACCCTGAACGCACAATTTGC
TGTCGTTTTTGTGGGCAAAAGTGGGATGGCTCCTCGTTGGTGCTCGGTACCATGTACTCT
TATGACATCTTTATGGCGACACCTTGTTGCGCTGAAAGACTGAAGTGTAACAACTGCTAC
AAGCCGCTTCTCCATCCACACCAGCGGCTGAACTACTCCGACTATTCGCATCCACTAACA
TGCCCGCACTGTCGTGTGGTGGACACGCACTTCGTTAAGCCGTTGTCCTACTGCTTCACC
AAACGGGTGTTCCCGTTATTCCAGCAGTGGCCATAA
Protein sequence:
MAPRRQGATGERESEDAHGCCVPGECLRPREPVRVEDAIRVLCNNDTCAAGRYMHRECFE
QWEAGVLAYLKSCGRARSWSERQRHQNLWTKKGYDLAFKACGCRCGRGHLKKDLDWIPPG
TAIRAEEEKKKRRRARPGRTPAAVDTRSRAFSLSSSGSCSPPSAPSEPSTSPTHAPPHSL
TPAKRNSKPEIVSDRVRAGAGANGIFSRRLDFSTFNLLPKYKVNSYQIKIEDEGNHGNDD
TRLFILSTLAGQHKPRVSCALCKETLHVFDRYPLVDGTFFLSPRQHTSSAVEVKVEGRTQ
FLTCVCMGCLERCDPERTICCRFCGQKWDGSSLVLGTMYSYDIFMATPCCAERLKCNNCY
KPLLHPHQRLNYSDYSHPLTCPHCRVVDTHFVKPLSYCFTKRVFPLFQQWP