| New model in OGS2.0 | DPOGS202004 |
|---|---|
| Genomic Position | scaffold79:+ 229999-231142 |
| See gene structure | |
| CDS Length | 510 |
| Paired RNAseq reads | 2213 |
| Single RNAseq reads | 6598 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010409 (2e-87) |
| Best Drosophila hit | CG5023 (2e-80) |
| Best Human hit | calponin-3 (2e-26) |
| Best NR hit (blastp) | calponin/transgelin [Aedes aegypti] (4e-85) |
| Best NR hit (blastx) | calponin/transgelin [Aedes aegypti] (8e-84) |
| GeneOntology terms | GO:0003779 actin binding GO:0031032 actomyosin structure organization |
| InterPro families | IPR001715 Calponin homology domain IPR000557 Calponin repeat IPR003096 Smooth muscle protein/calponin IPR001997 Calponin |
| Orthology group | MCL16268 |
Nucleotide sequence:
ATGCCTGCCAGAAACAAGGAACAGGAGGAAGAAGTTCTAAACTGGATCAGTGCTGTTCTT
GGGGAACCGCTTCCTAAAGGCGCGTATGAAGACATCTTGAAAGATGGAGTCATTCTGTGC
AAGCTTATCAATAAATTGGCACCCGGATCAGTTAAAAAGATCCAGGAAAGGGGAACCAAC
TTTCAACTTATGGAAAACATTCAAAGGTTTCAAGCAGCTATTAAAAAATACGGAGTTCCA
GAGGAGGAAATATTCCAGACAGCCGATCTTTTCGAGAGACGTAACATTCCTCAAGTCACC
TTGTGCTTATACTCTCTCGGTAGAATAACACAGAAGCATCCCGAATATAACGGTCCTCAA
TTAGGACCTAAGATGGCGGAGAAGAATGAAAGATCTTTCACAGAAGAACAACTTCGGGCT
CACAACGCTGAATTAAACCTACAAATGGGTTACAACAAGGGGGCGTCCCAATCGGGCCAT
GGTGGTTTTGGCAACACTCGTCATATGTAA
Protein sequence:
MPARNKEQEEEVLNWISAVLGEPLPKGAYEDILKDGVILCKLINKLAPGSVKKIQERGTN
FQLMENIQRFQAAIKKYGVPEEEIFQTADLFERRNIPQVTLCLYSLGRITQKHPEYNGPQ
LGPKMAEKNERSFTEEQLRAHNAELNLQMGYNKGASQSGHGGFGNTRHM