| New model in OGS2.0 | DPOGS211788 |
|---|---|
| Genomic Position | scaffold897:- 20425-25595 |
| See gene structure | |
| CDS Length | 4371 |
| Paired RNAseq reads | 530 |
| Single RNAseq reads | 1383 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004095 (3e-90) |
| Best Drosophila hit | CG7099 (3e-17) |
| Best Human hit | general transcription factor 3C polypeptide 1 (4e-12) |
| Best NR hit (blastp) | AGAP002656-PA [Anopheles gambiae str. PEST] (1e-39) |
| Best NR hit (blastx) | conserved hypothetical protein [Culex quinquefasciatus] (3e-23) |
| GeneOntology terms | GO:0003677 DNA binding GO:0000127 transcription factor TFIIIC complex GO:0009304 tRNA transcription GO:0006351 transcription, DNA-dependent GO:0009303 rRNA transcription GO:0003709 RNA polymerase III transcription factor activity GO:0042791 5S class rRNA transcription from RNA polymerase III type 1 promoter GO:0042797 tRNA transcription from RNA polymerase III promoter GO:0005515 protein binding GO:0005634 nucleus GO:0030529 ribonucleoprotein complex |
| InterPro families | IPR007309 B-block binding subunit of TFIIIC |
| Orthology group | MCL30611 |
Nucleotide sequence:
ATGAAAATAAGATTCTGGAATTACATCCTCGCATCAGAATCAATTTCAGTTTATGAGTTA
AAAACCTCACCTCCCTTCATTGAAATATTAGATCGTTTTACGATTATTGATGAAAACACT
GGGAATCTTTTGGATCCTCCAGATTACCTAGATGGACCATATGAATTTCAAAGTATTGAT
AATGAATATGGATCTTGCATTAATTTTAACACCAGAAAACAATTGCCCAAGGATGCATTA
AAGATGATTAGCTATGAAGAAACAGTTTCGAAATATGGAGACAAATTAATCCTTGTTGCC
TCTTTAGAAGAACGCTGGAAAGCTTTAGCACCCCATCTACCAATAATGTATTTGAACCAA
CTAACTCCAGTACACTTCTGTTTGTTGGAACTTATTGGAAAATCAAGACATAATGGCCAA
ATGACTGTTGGGAAAACTAATTTAAGCAAAGTAGTGAAAGATGCAAAACTGTTGTTTTAT
AATAGAACTGTCTTACAAAAATTTGATCTCATAAAAGTGCAATACTCTACACAAGTTGTG
GGCGGCAGAGCTTTAAAGAGTATATTACTAAGATTGAATAGGTTCTACCAACCTACATTG
TGTACTCAGCCTAAGATTGGCAAACTTCATAATATCATTAACTATCTGTTAGAAGCACCA
GATTATTCTGAACAGACTGACGTTATGATCAAAAAAGGTTTATTAACTCCACCACAAAGC
AAGAGATTACAAAAAACTATTAACATATTTAACTTTGAAGAAAAAGACATAATAATAAAC
CGTGGTGAAAATTCTAAAATGGAACCTTCAAGACACACTGTGAAAAGGAAATGTATATCT
CTCAACTGTCAGAGTGATGAGTCCCAATCAGATGAGGAAAGTAATGAAAATGATAGCAAT
TTAAAATGCCAGTATAAAGTGGGAGTTAATTTGGGGAGGCAGGCATATGAATGTTTCTTG
GCAGCAGGTCTTAAAGGTCTGACCCAAATTGATATAGCACAGCTTTTGGGTATAGAGTTT
TATACAAGCCGGACCATATGTAGAGTTTTCAAAGCAAGAAAAATTGTGAGAGAGTTCCTC
GAAGATAAGGGAAGACAGAGAACCGCTAGATATATCGCAATAGCTGCTACTAAATATATT
GACAAACAGTATGCCAAAGAAAAAAGCAAATTCTTGGAACACTGTAATAAAAGAAGTAAA
GATAAAAATAAAAGCAAAGGTGATTTAAGTTCTGACTCCGAAAGCGAAGTACCATTGAAA
AAGATAAAGAAAGCCAAAGAAAACACTCCAGTGAACGAAACTAAGCAGGATATTACAGAA
GTTAAAATCATGGAAGGATGCGAAAACGTGACAGAGTCTTTATTAAACCAAAAAAAGAAT
CCTACTCTAAGGCAGTTGAAATTCGCAAACGGTATTATAAAAGTCGTGCAAGATAGGAAA
TATGTGATGGGGTTCCAGGTGCTAAGCAATTTGGTTGCCAAAGAAACGGGCGAACCGCCG
ATGGATACGAAGGCGCTCAAAATATTTACCCAAAAGCTAGTAGCTGATGGGCAGCTCAAG
ATATTAAAGATAAAAAGGCCAAGCGTCAACGGCTTAACCTGCAATATATTTATTTGCGCG
CCACACATTAAAGCCTCCAACCCCATCATACGAGCAAAATACAAGGAGATCTGCGCCAGA
TCGGAAATTAGCAAGAAAGCTAAACTGCACAAATCGACACCTAGGAATATAAGGCCGGTG
ACACACTTCACATATCCTAGGTACATGAAAATTCAGAAACTCCACGAGTTCTTGACACAG
CTGGTTTACTTCAATGAGAGTAGCTGTAAAGATAGTATTAATGGTATCTCCTCACTGATG
AGTATTATACCGGAAATGACAGTTGAACTGGCTTTGGGTCATATAAGCCATATGGACGAA
ACTGATATAAATTATATCAAAACCGCAGCCTTTTCACTGGACGATAAGGTCAAAGACGCT
CCGATACGACTGAATCGAATAATATTACAATCGAGGAGCTTAATAAATTCCTTGAAGGTT
GTCTTAAAAGTTCTAGCGCTATTAGGTCTTATTCAATTAGTCCATCAGACTACAGTGCCT
ATCAACAGAGATGCTACTGACGTTTTCTATGTTAATCGTCACGCGAAGATTATAAACACC
ATGGGAAAATGGCCGCAACCGAATATCGATAAAACTGTTTTAGAAAAATCATATCATTTC
AAAAAGTTCGAAGACGTTCAGGAATATTGGAGCGATGTACACGATATAAGCATCAACACT
ACGATAAATGTACCGAGGAGGCAGCAATATAAATTATGTATACCAGTGAGAAACGAACAG
AACCTCACTAATTACGACACAGGGGAAATATTTGGTGATGGTTTGGGACCTTGTGGTTTC
GACTCTAGTATATACATGGATATAGCCAGGCTATGGCGATCATTTATGATAAAAAATCAC
ACTAAGAAAAAATTGCGCAAACCAAAAGTCAAAAAGGTTAAGAAGAAATCATCCGCTCCT
GCGGAAAGTAAAACTAAAATAAAAAGTATAAAGAACGAAAATAATGCAATTAAAATAAAA
GATTTCATGAATATACGGAAAAGACAGCTCGATTCGCATATAAAGTGGTCCAACTTCGAA
GACAGGATATTAATGATGTGTAAAGCGGCTGTCACTATAATGAGTCCAGTGTCACAACCA
GGATGCTTAAGGGTTAGGAATATTGTCGCCAAAGACTTGCTTTCAATATTCGATCCGAGA
AAAACAGCAGCCATTTGTCACAAAAGAGCCATCATCCTAGAAACGAATTCAACTTTGGCA
CACGAGAAAGACTGTATCCTAAACGAATTAAGATGTCATAGAAACCTGATACAAAAGTAC
GAAGGTCTCTTAAGAGTTTTAAGACTTAGAAATTACGCGAATCTTTCAAAATATGTAAAC
GAATCAAGATTGCCGCTGTTGCAATTGATCTGGATTATAGCTCAGATCGCGGAGACTAAG
CCTTTTAATAGGAGAATGCCGTGCATGGCAATCGACCTCAAAGATTTTAATAAGAAATAC
AACATATCACCGTCGTCGGCGAACAGAGCTTACAACTTATATAGAACGCCGACGTCTTCG
AGACCCGAATTCGCTATATTAAAAGAGGCCATCATTATGACCATAATGCTGTCATTGGAC
GAGCCAGTAAATAAGAAAATGGGGAAAAAGATATTTTCAATTTTTAATGTTTACGACGAG
CCCATGCTTAGAAGTGCCATACAACAGCTGAGAAAAAGTGGAGCGATCGCTGCCAGAGAC
AAAATGATCAACAGCCAATTGAAGAAAGAACATTGCGAAGACATAGTCCAAACTATGTAT
AAAATAGCCATGATGTACAGAAGAAAATGGATGAGCCATCTGGAGCCAGAGTTTTTGGAC
AGTCTTTCAGAGTTACTTAGCAGCAAGATACCGCACAACGGTTTGAAAGGATCCTGCGAT
ATCAATTGTCTGTTATGCGAAACGTACAGCCATGATGTTATAGATATCGTCTCTGACACG
ATACCCGTAGTGACGGGTTCCGCGGGATCTATATTGCAGGAGGAACAGTTAAATGTCATC
GACATTGAAACTAAATTCAAATTAAAGTCCGGCCTCCTTGGATGGAAAAACAAATCTAAC
GTAGAAACATTTTCTGAACTATATCATAATATCGGCTATGATGGGATATTTGAAAACTTA
ATAAGGAAATCTATTGTGGATTACTCAAAGACTGAGGAAATTGATGAGATGGACAATATA
ATACAATTTTTGGAAGAAAAGGAATCGAAGGGATGCACATTTAAAGAATTGGATGAGAAA
ATACCTGATGACCAGAACACATTAGTTAAAAGATTATTAGATCTTGAGAGCAAAGAAATC
GTAAAGAGGGTTGGGCTTTACGAAAACGTGATTGTGCTGAAGAAATACGCGAAACCCTAC
TTATTGTTTGTACCTAAAAACCTTTACATGATACCAACGCCCTGGCTGACATTAAAGGCC
GAGATTCAGAAGGACGTATTCTTCAAATGGGCAGGCGTTATAATGAACAAAGTATTCGAG
TGCCCCGGCTGCTCAGTAGCATTCATCAGCAATAGTATAGAATACATAACATATAGAAGC
GTCCAAGAAGTATGTATGTTCCTAGAACAGACGAAATGCGTGGAACTGGTCGGTGTGGAG
AAGAAGGACACAGATCTGTTCACAGAGGAAGATTACAACTGGGTACCGGAGTTATACGAG
TTTAATCCTTACGAATCACCAGATAACATTCTAGTAGTCCCCGTTAAGGATTGTTTAAGC
AAATATGCTTATATAAGAAGCAAGATATTAAACGACATTGAACTGTCATAA
Protein sequence:
MKIRFWNYILASESISVYELKTSPPFIEILDRFTIIDENTGNLLDPPDYLDGPYEFQSID
NEYGSCINFNTRKQLPKDALKMISYEETVSKYGDKLILVASLEERWKALAPHLPIMYLNQ
LTPVHFCLLELIGKSRHNGQMTVGKTNLSKVVKDAKLLFYNRTVLQKFDLIKVQYSTQVV
GGRALKSILLRLNRFYQPTLCTQPKIGKLHNIINYLLEAPDYSEQTDVMIKKGLLTPPQS
KRLQKTINIFNFEEKDIIINRGENSKMEPSRHTVKRKCISLNCQSDESQSDEESNENDSN
LKCQYKVGVNLGRQAYECFLAAGLKGLTQIDIAQLLGIEFYTSRTICRVFKARKIVREFL
EDKGRQRTARYIAIAATKYIDKQYAKEKSKFLEHCNKRSKDKNKSKGDLSSDSESEVPLK
KIKKAKENTPVNETKQDITEVKIMEGCENVTESLLNQKKNPTLRQLKFANGIIKVVQDRK
YVMGFQVLSNLVAKETGEPPMDTKALKIFTQKLVADGQLKILKIKRPSVNGLTCNIFICA
PHIKASNPIIRAKYKEICARSEISKKAKLHKSTPRNIRPVTHFTYPRYMKIQKLHEFLTQ
LVYFNESSCKDSINGISSLMSIIPEMTVELALGHISHMDETDINYIKTAAFSLDDKVKDA
PIRLNRIILQSRSLINSLKVVLKVLALLGLIQLVHQTTVPINRDATDVFYVNRHAKIINT
MGKWPQPNIDKTVLEKSYHFKKFEDVQEYWSDVHDISINTTINVPRRQQYKLCIPVRNEQ
NLTNYDTGEIFGDGLGPCGFDSSIYMDIARLWRSFMIKNHTKKKLRKPKVKKVKKKSSAP
AESKTKIKSIKNENNAIKIKDFMNIRKRQLDSHIKWSNFEDRILMMCKAAVTIMSPVSQP
GCLRVRNIVAKDLLSIFDPRKTAAICHKRAIILETNSTLAHEKDCILNELRCHRNLIQKY
EGLLRVLRLRNYANLSKYVNESRLPLLQLIWIIAQIAETKPFNRRMPCMAIDLKDFNKKY
NISPSSANRAYNLYRTPTSSRPEFAILKEAIIMTIMLSLDEPVNKKMGKKIFSIFNVYDE
PMLRSAIQQLRKSGAIAARDKMINSQLKKEHCEDIVQTMYKIAMMYRRKWMSHLEPEFLD
SLSELLSSKIPHNGLKGSCDINCLLCETYSHDVIDIVSDTIPVVTGSAGSILQEEQLNVI
DIETKFKLKSGLLGWKNKSNVETFSELYHNIGYDGIFENLIRKSIVDYSKTEEIDEMDNI
IQFLEEKESKGCTFKELDEKIPDDQNTLVKRLLDLESKEIVKRVGLYENVIVLKKYAKPY
LLFVPKNLYMIPTPWLTLKAEIQKDVFFKWAGVIMNKVFECPGCSVAFISNSIEYITYRS
VQEVCMFLEQTKCVELVGVEKKDTDLFTEEDYNWVPELYEFNPYESPDNILVVPVKDCLS
KYAYIRSKILNDIELS