| New model in OGS2.0 | DPOGS201346 |
|---|---|
| Genomic Position | scaffold1837:+ 23510-30642 |
| See gene structure | |
| CDS Length | 933 |
| Paired RNAseq reads | 182 |
| Single RNAseq reads | 533 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003032 (1e-66) |
| Best Drosophila hit | CG5973, isoform D (2e-73) |
| Best Human hit | alpha-tocopherol transfer protein-like (4e-33) |
| Best NR hit (blastp) | AGAP009364-PA [Anopheles gambiae str. PEST] (5e-83) |
| Best NR hit (blastx) | AGAP009364-PA [Anopheles gambiae str. PEST] (2e-80) |
| GeneOntology terms | GO:0005885 Arp2/3 protein complex GO:0016918 retinal binding GO:0006810 transport GO:0005215 transporter activity |
| InterPro families | IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
| Orthology group | MCL20289 |
Nucleotide sequence:
ATGGGATTACAATTCGAAACGGATGGTACACCGTACGTTATGTGTGGTGATGAAAAGGTC
AAGTTGGAAAAATTTCCCATCACAGAGGATTTCTATGTCGAAAAAGCCAGAAGTGAATTA
CGTGAAACGGAGGAAAACATTGTACAGGCCCTGAAAGAATTAAGGGAACTGTTGCAACAG
GAATCAAATCTTCTGGTGCCTTTCGACAACGATGAGTTTCTAATGAAATTTCTGCGTCCA
TCAAAATTATATGCGGAGAGCGCATTTAAACGGATACAAGCATATTACAAGTTCAGACTC
TCTCACAAGGACTACTGCTGTGATTTGTATCCGAGTAAAGTGCGCTCGGCCTTCGACCAT
TCCATAGTGTCCATCCTTTCGCCTCGAGACCAACATGGCCGCCGCATCATATATGTGGAA
TCTGGCGAACGTTGGAATCCTCGTGAGGTACCTTTAAAGGAAGTTTTTCGAGGCATACAG
CTGGGTCTGGAGGGAGCGATGGTTGAACCACGTACGCAAGTCTGTGGTGTGGCGGTCGTG
CTAAACATGAAGGGCTTGTCATTTTCACAGATAATGCAATTCACGCCCTCATTTGCCAAA
ATGGTTGTTGATTGGATTCAGGATTGCATTCCGATTCGCCTAAAAGGAGTACACGTGATA
AATCAGCCATATATATTCAGTATGTTGTTCGCTATATTCAAACCGTTTCTACGCGAAAAG
TTAAGATCTAGAATATTCTTCCACGGCTCCGATAAAGAGTCTTTATTGAAACATATACAA
CCTGGTTCCTTGATGAGAAGGGTTGGTGGAGACTTACCTGATGATGACATAACTGGTGAA
GTTTTGTGGAAGATGCTCAATCATTACGAAGATGAATTCAGACACGCAAATTCCTATGGT
TACGTCACTAATAACAACGAAATCAAGAAATAA
Protein sequence:
MGLQFETDGTPYVMCGDEKVKLEKFPITEDFYVEKARSELRETEENIVQALKELRELLQQ
ESNLLVPFDNDEFLMKFLRPSKLYAESAFKRIQAYYKFRLSHKDYCCDLYPSKVRSAFDH
SIVSILSPRDQHGRRIIYVESGERWNPREVPLKEVFRGIQLGLEGAMVEPRTQVCGVAVV
LNMKGLSFSQIMQFTPSFAKMVVDWIQDCIPIRLKGVHVINQPYIFSMLFAIFKPFLREK
LRSRIFFHGSDKESLLKHIQPGSLMRRVGGDLPDDDITGEVLWKMLNHYEDEFRHANSYG
YVTNNNEIKK