| New model in OGS2.0 | DPOGS206113 |
|---|---|
| Genomic Position | scaffold89:+ 47551-49665 |
| See gene structure | |
| CDS Length | 858 |
| Paired RNAseq reads | 36391 |
| Single RNAseq reads | 101313 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006835 (5e-63) |
| Best Drosophila hit | ribosomal protein L23A (4e-55) |
| Best Human hit | 60S ribosomal protein L23a (4e-45) |
| Best NR hit (blastp) | ribosomal protein L23A [Manduca sexta] (3e-84) |
| Best NR hit (blastx) | ribosomal protein L23A [Manduca sexta] (5e-69) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0003723 RNA binding GO:0003735 structural constituent of ribosome GO:0005622 intracellular GO:0005840 ribosome GO:0006412 translation |
| InterPro families | IPR001014 Ribosomal protein L23/L25, conserved site IPR019985 Ribosomal protein L23 IPR005633 Ribosomal protein L23/L25, N-terminal IPR013025 Ribosomal protein L25/L23 IPR012678 Ribosomal protein L23/L15e IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL11735 |
Nucleotide sequence:
ATGCCTCCTAAGAAGCAACCAGAGAAATCCGGGGCGCCAGGGGCTAAGCCCGCTGAAAAG
AAACCCGCTTCCGCTAAAACTCCAGCGGCGGCACCCAAGGCTGCATCTGCAAGTAGTAGC
GCTGCTAAACCAGCATCCGCTAAAACCCCTGCACCTGCGCCGAAAGCTGCAGCACCTAAA
GCTGCATCTGCTGCCAAGGCTGCACCAGCTAAAGCGGCTCCCGCTGCCAAGCCTGCTGAA
AAGAAACCAGCATCTGCACCCTCTGCTAAGCCAGGCTCTGCTAAGGCAGCAGCTCTTAAG
GCTAAGTCTAGTGCCAAGCCCTCTGTGAAGAAGGCTGCATCCAAAGCAGTCAAGCCCAAA
CCAGCAGCGGCTAAACTTAAGATTGCACCCAAGCCTAAGAAGACTGGCATCAAGGGACAG
AAGAAAGTTGTTAAACCAGTTGTAAAAGCCCTTAAAGTTCAACGTAAGGTTGTCAAAGGT
GAACATGGAAAGCGTGTACGTAAGATCCGCACATCTGTGCACTTCCGCAGACCCAAGACT
TTTGAACCTCCAAGGAATCCTAAATACCCAAGGAAGTCATTACCGAAGAGGAACCGTATG
GATGCATACAACATTATTAAATATCCGTTGACATCTGAAGCCGCCATGAAGAAGATTGAG
GACAACAATACCTTGGTATTCATTGTTCACACCAGCTCCAACAAGCACCACATCAAAGCA
GCTGTGAAGAAGCTTTATGACATCAATGTGGCTAAAGTGAACACCCTTATCCGACCTGAT
GGCAAAAAGAAGGCGTATGTACGACTCGCAAGAGACTACGACGCGTTAGACGTTGCCAAT
AAGATTGGAATCATATAA
Protein sequence:
MPPKKQPEKSGAPGAKPAEKKPASAKTPAAAPKAASASSSAAKPASAKTPAPAPKAAAPK
AASAAKAAPAKAAPAAKPAEKKPASAPSAKPGSAKAAALKAKSSAKPSVKKAASKAVKPK
PAAAKLKIAPKPKKTGIKGQKKVVKPVVKALKVQRKVVKGEHGKRVRKIRTSVHFRRPKT
FEPPRNPKYPRKSLPKRNRMDAYNIIKYPLTSEAAMKKIEDNNTLVFIVHTSSNKHHIKA
AVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII