| New model in OGS2.0 | DPOGS213213 |
|---|---|
| Genomic Position | scaffold455:+ 40991-43853 |
| See gene structure | |
| CDS Length | 933 |
| Paired RNAseq reads | 2026 |
| Single RNAseq reads | 5830 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007360 (2e-111) |
| Best Drosophila hit | CG4389, isoform A (2e-34) |
| Best Human hit | hydroxyacyl-coenzyme A dehydrogenase, mitochondrial isoform 2 precursor (5e-97) |
| Best NR hit (blastp) | PREDICTED: similar to 3-hydroxyacyl-coa dehyrogenase [Tribolium castaneum] (7e-125) |
| Best NR hit (blastx) | PREDICTED: similar to 3-hydroxyacyl-coa dehyrogenase [Tribolium castaneum] (2e-119) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0003824 catalytic activity GO:0005488 binding GO:0006631 fatty acid metabolic process GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity GO:0050662 coenzyme binding GO:0070403 NAD binding GO:0008152 metabolic process GO:0005575 cellular_component |
| InterPro families | IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IPR016040 NAD(P)-binding domain IPR013328 Dehydrogenase, multihelical IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site |
| Orthology group | MCL18466 |
Nucleotide sequence:
ATGAATCAATTTGGCATAATAACGCGAAATTTTTCAAGATCTTCTGCTGTACAGAGTGCT
ATTAAAAATGTAACCGTCATTGGCGGAGGGCTCATGGGTTCGGGAATTGCTCAGGTAGCA
GCACAAGCTGGTCAAAATGTGACCTTAGTGGACGTTAGCTCTGATGTGTTAGCTAAATCT
CAAAAATCAATAGCCACCAATCTGAATAGAGTCGCTAAGAAGATTTATAAAGACAAACCT
CAGGATGGTGAGAAGTTTGTTGCTGAGGCTATTGCTAGAATAAAAACCAACACAGATCCT
GCAGCAGCCAGCCAAGAAGCTGATTTGATTGTGGAGGCAATCGTTGAAAACATGGATGTA
AAACACCAATTGTTCAAAAAGCTTGATGCGGCGGCTCCTGGTCATACCATCTTTGCCTCG
AACACATCCTCCCTCTCTATCAATGAGATCTCTTCAGTTGTTAAGAGGACAGACAAATTT
GGTGGTCTACACTTCTTCAATCCCGTGCCGGTGATGCGTCTACTTGAAGTGGTCCGTGGT
GAGAAAACATCTGACAACACTTACAAGGCCATGATGGAATGGGGCAAGACTGTGGGCAAG
ACCTGCATAACTTGCAAAGATACTCCTGGATTTGTTGTCAACAGGCTTCTGGTTCCGTAT
ATTGCAGAGGCAATTCGGTTGTTTGAGAGAGGTGATGCTTCAGCTCGGGACATTGATGTG
GCCATGAAGTTAGGTGCTGGTTATCCGATGGGACCGCTGGAGTTAGCTGACTATGTAGGT
CTGGACACTAACAAGTTTATCTTAGACGGCTGGCATAAAAAATACCCCGAAGAACCCTTA
TTCAAACCCAGCCCTCTCCTTAATAAACTGGTGTCGGAAGGGAAGCTTGGAGTCAAGAGC
GGAGAAGGCTTCTACAAGTATGAAAAGAAATGA
Protein sequence:
MNQFGIITRNFSRSSAVQSAIKNVTVIGGGLMGSGIAQVAAQAGQNVTLVDVSSDVLAKS
QKSIATNLNRVAKKIYKDKPQDGEKFVAEAIARIKTNTDPAAASQEADLIVEAIVENMDV
KHQLFKKLDAAAPGHTIFASNTSSLSINEISSVVKRTDKFGGLHFFNPVPVMRLLEVVRG
EKTSDNTYKAMMEWGKTVGKTCITCKDTPGFVVNRLLVPYIAEAIRLFERGDASARDIDV
AMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKYPEEPLFKPSPLLNKLVSEGKLGVKS
GEGFYKYEKK