| New model in OGS2.0 | DPOGS213916 |
|---|---|
| Genomic Position | scaffold2509:- 394-7637 |
| See gene structure | |
| CDS Length | 684 |
| Paired RNAseq reads | 13 |
| Single RNAseq reads | 29 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004624 (6e-93) |
| Best Drosophila hit | ora transientless (2e-71) |
| Best Human hit | glycine receptor subunit beta isoform A precursor (8e-19) |
| Best NR hit (blastp) | histamine-gated chloride channel 1 [Apis mellifera] (4e-77) |
| Best NR hit (blastx) | histamine-gated chloride channel 1 [Nasonia vitripennis] (7e-78) |
| GeneOntology terms | GO:0019183 histamine-gated chloride channel complex GO:0019182 histamine-gated chloride channel activity GO:0007268 synaptic transmission GO:0045472 response to ether GO:0009636 response to toxin GO:0030534 adult behavior GO:0005230 extracellular ligand-gated ion channel activity GO:0045211 postsynaptic membrane GO:0006811 ion transport GO:0016021 integral to membrane GO:0043052 thermotaxis |
| InterPro families | IPR006201 Neurotransmitter-gated ion-channel IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR018000 Neurotransmitter-gated ion-channel, conserved site |
| Orthology group | MCL15282 |
Nucleotide sequence:
ATGGCGGCTGAGAAATTATTATGGCTGACAATGATTTTAATTCGTTTGTGGTTTGGAGCT
GGGGATCTCTGTTACGCACAGTCAACGCTGGTGGCCTTCCAAGATCTCCTGCCTGATGAT
CCTCGTCTTTACGACAAGATGAGGCCTCCGAAGAAAGACGATCAGCCCACTATAGTCAAC
TTCCACGTGACAGTCATGGGGCTGGACTCCATCGATGAGAACTCAATGACTTACGCCGCA
GACATATTTTTCGCTCAAACGTGGAAAGACTTCCGGCTCAGGCTGCCGGAGAATATGACA
ACAGAATACAGATTACTAGAAGTCGACTGGCTGAAACAGATGTGGCGTCCGGATTCGTTT
TTCAAGAACGCTAAATCAGTGACCTTCCAAACGATGACCATACCTAACCACTATGTGTGG
TTATACAAGGACAAGACCATACTTTACATGGTGAAGTTGACTCTGAAGTTGAGCTGTGCC
ATGAATTTCCTCATCTACCCTCACGACACCCAAGAGTGCAAGCTGCAAATGGAAAGCTGT
GAGTGTAGTCTTAATATTTTATTCGCTTTCGCGCTTGTATGTGAGAAGTCTAATCTAGCC
TCAAAGGAGTTTTGTGTCCTCGATAGATCAAAGCAGTACTTCTTTGCACTCCCACCTAAT
GAAATGTCACCAAGCCCAAGGTAG
Protein sequence:
MAAEKLLWLTMILIRLWFGAGDLCYAQSTLVAFQDLLPDDPRLYDKMRPPKKDDQPTIVN
FHVTVMGLDSIDENSMTYAADIFFAQTWKDFRLRLPENMTTEYRLLEVDWLKQMWRPDSF
FKNAKSVTFQTMTIPNHYVWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESC
ECSLNILFAFALVCEKSNLASKEFCVLDRSKQYFFALPPNEMSPSPR