| New model in OGS2.0 | DPOGS214594 |
|---|---|
| Genomic Position | scaffold34:- 188867-190576 |
| See gene structure | |
| CDS Length | 1710 |
| Paired RNAseq reads | 213 |
| Single RNAseq reads | 571 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005125 (0.0) |
| Best Drosophila hit | DNApol-iota, isoform A (3e-89) |
| Best Human hit | DNA polymerase iota (6e-77) |
| Best NR hit (blastp) | DNA polymerase IV [Culex quinquefasciatus] (7e-116) |
| Best NR hit (blastx) | PREDICTED: similar to DNA polymerase iota [Tribolium castaneum] (5e-111) |
| GeneOntology terms | GO:0003887 DNA-directed DNA polymerase activity GO:0019985 translesion synthesis GO:0003684 damaged DNA binding |
| InterPro families | IPR017961 DNA polymerase, Y-family, little finger domain IPR017963 DNA-repair protein, UmuC-like, N-terminal IPR001126 DNA-repair protein, UmuC-like |
| Orthology group | MCL15486 |
Nucleotide sequence:
ATGGTGCAGAAACCAGAACTGCGCTGTTTTCCGCTAGGAATCCAACAGAAAAACATCGTT
GTAACCAGTAATTATGAAGCCAGGAAGTACGGTATACGAAAGTGCATGCTCGTGTCTGAT
GCTTTAAAAGTATGTCCGAATTTAAAACTTATTAACGGCGAAGACTTACATGATTATAGA
GCGGCGTCCAATAAAATATTTACAGTTTTACAAACGTTTAAGTGTCCAGTGGAGAAGTTA
GGAATGGATGAAAATTTTATTGATGTCACAAATATAGTACAAGAAAGAATAAAAAATGTT
AATTTAAAAAGTATCACAGTATCAGGTCATTTATACACTGAGTCCAACGCAGAGTGTGTG
TGTGGTTGCCATGCAAGACTGAAAGTAGCATCACAAATAGCCTCTGAAATGAGGCATAAA
ATTTACGACGAATTAGGTTTTACTACTTGTGCTGGGATAGCACACAATAAACTGTTGGCT
AAGCTTATATGTCCTTTAAATAAGCCTAATGATCAAACAACAATTTACCCCGAGCATGGC
GTCAGTTTTATGTCTACCTTGCAAAGTGTCCGCTCAATACCAAGTATAGGATCCAAAACT
ACTGAAGCCCTCATCTCTCAAAAAATTATCACTGTGAGGGATTTACAAGAAGTTTCTATA
GAAGTATTGAAAAAGCATTTTAGTTCTGACATGGCGGTGAGACTTAAGAATTTAAGTGTC
GGTGAAGATAATACTCCAATTAAACAAACGGGCAGGCCTCAGAGTATAGGTTTAGAAGAT
AGCTTTAAGACTGTGAGTGTTAAGAGTGAAGTTGAAGAAAAATTTCAAGCATTGCTTCAA
AGGCTGTTGATTCTAGTGAGAGAAGATGGACGCATTCCAGTATCACTAAGAGTGACTCTG
AGGAAAAAAGATGTGAAACGATTAAGCAGTCACAGAGAGTCCAGGCAGTGTCAGGTATCT
CCTTCCATCTTCACAATTAACAATGGAACACTCACAGTTACAGATTCTGGTAGGCAGAAG
CTAATGAGCATAATAATGAGATTATTTAACAAATTAATTGACTTATCGAAACCATTCCAT
TTAACTTTAGTGGGTTTGGCATTCACAAAGTTCCAAGAGCGTATGACAGGTAGAGGGTCC
ATTGTCAATTATTTAATGAATGATATATCGGTCCAATCCGTACTCAATATTACAAATGAC
TGTGATACTTCAGCTTCTTCTATGGATTATTCGGCTGCGTCTCCTAGTAGTAGTACCACC
ACTGATCTATCTGACGGTGAAGTGGAACCATCACCTAAGAAACCTAAAAAGGGAACCTGG
ATAGCTAAAAGACGTTGCTTATCAAAGGAGGAAGTTGCATCTCCTAGTAAACTTAAAGTA
GGCGAGTTGAGGCTCAATTCTAAAGAACTAGAAAAGGTTTCTGAATTAAGATTAAATTCC
AGAGACAGGTCACTAACCCCTAGAGCGAGTCCTGCAAAAGACAATCTCTCTGATACTTCA
GACACTACAAAGGATGCAGCTGACAGTAAATGTGACATTTGTCCTAGTTATGTAGATAAA
GAAGTCTTTAATGCTCTCCCTGAAGAAATGCAACAAGAACTGAAAGCCATGTGGAAGAAT
CCCTCCAGTTCAGGGGTCAGAAGTAGCCCCAGAACATTGAACAAAGCTAAACCGAACACT
CTTTTAAAATATTTTGTTCCAAACAAATAG
Protein sequence:
MVQKPELRCFPLGIQQKNIVVTSNYEARKYGIRKCMLVSDALKVCPNLKLINGEDLHDYR
AASNKIFTVLQTFKCPVEKLGMDENFIDVTNIVQERIKNVNLKSITVSGHLYTESNAECV
CGCHARLKVASQIASEMRHKIYDELGFTTCAGIAHNKLLAKLICPLNKPNDQTTIYPEHG
VSFMSTLQSVRSIPSIGSKTTEALISQKIITVRDLQEVSIEVLKKHFSSDMAVRLKNLSV
GEDNTPIKQTGRPQSIGLEDSFKTVSVKSEVEEKFQALLQRLLILVREDGRIPVSLRVTL
RKKDVKRLSSHRESRQCQVSPSIFTINNGTLTVTDSGRQKLMSIIMRLFNKLIDLSKPFH
LTLVGLAFTKFQERMTGRGSIVNYLMNDISVQSVLNITNDCDTSASSMDYSAASPSSSTT
TDLSDGEVEPSPKKPKKGTWIAKRRCLSKEEVASPSKLKVGELRLNSKELEKVSELRLNS
RDRSLTPRASPAKDNLSDTSDTTKDAADSKCDICPSYVDKEVFNALPEEMQQELKAMWKN
PSSSGVRSSPRTLNKAKPNTLLKYFVPNK