| New model in OGS2.0 | DPOGS215324 |
|---|---|
| Genomic Position | scaffold2394:- 62478-63891 |
| See gene structure | |
| CDS Length | 549 |
| Paired RNAseq reads | 71 |
| Single RNAseq reads | 224 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007962 (5e-92) |
| Best Drosophila hit | CG4866, isoform B (2e-68) |
| Best Human hit | U3 small nucleolar ribonucleoprotein protein IMP3 (1e-64) |
| Best NR hit (blastp) | PREDICTED: similar to U3 small nucleolar ribonucleoprotein protein IMP3 [Tribolium castaneum] (8e-81) |
| Best NR hit (blastx) | PREDICTED: similar to U3 small nucleolar ribonucleoprotein protein IMP3 [Tribolium castaneum] (2e-78) |
| GeneOntology terms | GO:0019843 rRNA binding GO:0003723 RNA binding GO:0005622 intracellular GO:0003676 nucleic acid binding GO:0030529 ribonucleoprotein complex |
| InterPro families | IPR002942 RNA-binding S4 IPR022801 Ribosomal protein S4/S9 IPR001912 Ribosomal protein S4/S9, N-terminal |
| Orthology group | MCL14349 |
Nucleotide sequence:
ATGGTACGAAAATTAAAATTTCATGAGCAAAAATTGCTAAAAAAAGTAGACTTCATATCA
TGGAAAGTCGACAACAATTTAAGCGAGGTTAAGGTTATGAAAAAATTTCACATTCAGAAG
AGAGAAGACTATACAAAGTACAACAAGTTATCCAGAGAAATAAGGGAACTAGCTAACAAA
ATTAAAGACTTAGATGCTAACACAGAATTTAGAACCGAAGCAAGTGCACAGCTTTTAGAA
AAATTATACCAAATGGGACTCATACCAACACGTTGGGATCTGGCTCTCGCTAGTAATGTT
CCAGCCAGTGCCTTTTGTAGACGAAGATTACCTGTGGTTATGGTGAGAAACAAAATGTCA
GAGAATCTCAAAGAAGCTACAAAGTTTATAGAGCAGGGTCATGTGCGTGTTGGTCCGGAG
GTTGTTAAAGACCCAGCATTCCTTGTCACAAGATCTCTCGAGGACTTTGTCACGTGGGTC
GATGGTTCCGCCATCAGGAAGCATGTGATGGAGTATAATGACATGAGGGATGACTTTGAC
ATGTTGTAA
Protein sequence:
MVRKLKFHEQKLLKKVDFISWKVDNNLSEVKVMKKFHIQKREDYTKYNKLSREIRELANK
IKDLDANTEFRTEASAQLLEKLYQMGLIPTRWDLALASNVPASAFCRRRLPVVMVRNKMS
ENLKEATKFIEQGHVRVGPEVVKDPAFLVTRSLEDFVTWVDGSAIRKHVMEYNDMRDDFD
ML