| New model in OGS2.0 | DPOGS213206 |
|---|---|
| Genomic Position | scaffold188:- 10-655 |
| See gene structure | |
| CDS Length | 453 |
| Paired RNAseq reads | 115 |
| Single RNAseq reads | 454 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007399 (1e-74) |
| Best Drosophila hit | CG3436, isoform A (2e-43) |
| Best Human hit | U5 small nuclear ribonucleoprotein 40 kDa protein (1e-39) |
| Best NR hit (blastp) | PREDICTED: similar to CG3436-PA, isoform A [Apis mellifera] (9e-52) |
| Best NR hit (blastx) | PREDICTED: similar to CG3436-PA, isoform A [Apis mellifera] (1e-49) |
| GeneOntology terms | GO:0005682 U5 snRNP GO:0000398 nuclear mRNA splicing, via spliceosome GO:0030532 small nuclear ribonucleoprotein complex GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL13313 |
Nucleotide sequence:
ATGCCGGAACTGGAAATAAAAAGAAAAGCTGAAGAATATGCTGTGGTACCGGCTAAGAAA
ACTCGACATGAAATATCTGTTGTTGGCACGAGAGAAAAGGCTGTAGTAACCTCCTCGGTA
CCCAGAACATCAAATCTTTATGCACCTATCATGCTGTTAGAAGGACACCAAGGCGAAATT
TTCACAGCAAAGTTTCATCCTGAAGGCAAACATTTGGCTTCGGCAGGCTTTGACAGACAG
ATATTACTTTGGAATGTGTATGGGCAGTGTGACAATGTAATGGTAATGAAAGGTCACACG
GGTGCCATAATGGAGTTATGTTTTTCACCTGACGGTGCTCACATGTACACATGTGCCACA
GACAACTCAGTGGCGGTATGGGATGTCCCCACTGGAGTTAGGATCAAGAAATTAAAAGGA
CATGCAAATTTTGTTAATTCTGTATCAGGTTAG
Protein sequence:
MPELEIKRKAEEYAVVPAKKTRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEI
FTAKFHPEGKHLASAGFDRQILLWNVYGQCDNVMVMKGHTGAIMELCFSPDGAHMYTCAT
DNSVAVWDVPTGVRIKKLKGHANFVNSVSG