| New model in OGS2.0 | DPOGS200413 |
|---|---|
| Genomic Position | scaffold451:+ 51949-52761 |
| See gene structure | |
| CDS Length | 813 |
| Paired RNAseq reads | 187 |
| Single RNAseq reads | 430 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008990 (1e-67) |
| Best Drosophila hit | twist, isoform B (4e-21) |
| Best Human hit | twist-related protein 2 (3e-31) |
| Best NR hit (blastp) | hypothetical protein LOC100160123 [Acyrthosiphon pisum] (8e-35) |
| Best NR hit (blastx) | hypothetical protein LOC100160123 [Acyrthosiphon pisum] (3e-29) |
| GeneOntology terms | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005515 protein binding GO:0005634 nucleus GO:0005667 transcription factor complex GO:0005737 cytoplasm GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0006916 anti-apoptosis GO:0007275 multicellular organismal development GO:0016564 transcription repressor activity GO:0030154 cell differentiation GO:0045668 negative regulation of osteoblast differentiation GO:0045892 negative regulation of transcription, DNA-dependent |
| InterPro families | IPR001092 Helix-loop-helix DNA-binding domain IPR011598 Helix-loop-helix DNA-binding IPR015789 Twist |
| Orthology group | MCL15432 |
Nucleotide sequence:
ATGAGTTACACCTGCGATAATAGAGTGCCTATCAAACAGGAGACCGATCAGGAGTGCTTT
GACGACGAGGAGAGGTTCTACGGATACGCTCCCATTGAGGTTAAAAGGGATGCAGAAATG
ACATTTTCTCCATCATCACCAACACATTTAATGGATCTGAGCAACGGCTCGGAACGACCC
CCGCAGATTTTACAGTCGTGGCAAGGCAACATTGTGTTCGAGGGGGACGACCGCGAATAC
CAACAGACGCAATTCCATACTTATGATCAAATGTGTATCGCAGATCCGCGGCATAAGCAA
TTCACGCGGAACTTCTACTTTGATGATTCCAATTCTCAAGACAGGAGTGTAAATTTCTAC
GAAAGCAGTGAAGTTCCACAACCCGGTGACAACACGTATCGCGCCTCGACGGAAGAACGA
AGCGATGAAAACGACGATCAAAGAAGATCAAGGAAACGGTCATCGAAATCATCCCGTCGA
AAAACACAATCGTTCGAAGAAGTCCAGATACAAAGAGTAATGGCCAATGTAAGAGAGCGT
CAACGCACTCAGAGCTTGAACGAAGCTTTTGCGAGTTTAAGACAAATCATTCCATCTCTG
CCCAGTGATAAACTTTCTAAAATACAAACCCTGCAGCTAGCGACGCAGTACATAGAATTT
TTATATCAGATTTTATCCAACAGCGACTCCTCTTCGAACAGTGAAGTCACCGACGCCAAC
ACTGAACACGGCAAATACTTAGCACAGGATAAACTAAGTTACGCTTTTTCAGTGTGGCGT
ATGGAAGGCGAATTCACCAACGGACAAACGTGA
Protein sequence:
MSYTCDNRVPIKQETDQECFDDEERFYGYAPIEVKRDAEMTFSPSSPTHLMDLSNGSERP
PQILQSWQGNIVFEGDDREYQQTQFHTYDQMCIADPRHKQFTRNFYFDDSNSQDRSVNFY
ESSEVPQPGDNTYRASTEERSDENDDQRRSRKRSSKSSRRKTQSFEEVQIQRVMANVRER
QRTQSLNEAFASLRQIIPSLPSDKLSKIQTLQLATQYIEFLYQILSNSDSSSNSEVTDAN
TEHGKYLAQDKLSYAFSVWRMEGEFTNGQT