| New model in OGS2.0 | DPOGS204797 |
|---|---|
| Genomic Position | scaffold878:+ 46726-47654 |
| See gene structure | |
| CDS Length | 672 |
| Paired RNAseq reads | 219 |
| Single RNAseq reads | 509 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010827 (2e-93) |
| Best Drosophila hit | Csl4 (8e-41) |
| Best Human hit | 3'-5' exoribonuclease CSL4 homolog (2e-38) |
| Best NR hit (blastp) | PREDICTED: similar to Csl4 CG6249-PA [Apis mellifera] (4e-59) |
| Best NR hit (blastx) | PREDICTED: similar to Csl4 CG6249-PA [Apis mellifera] (7e-59) |
| GeneOntology terms | GO:0000176 nuclear exosome (RNase complex) GO:0006397 mRNA processing GO:0000177 cytoplasmic exosome (RNase complex) GO:0000175 3'-5'-exoribonuclease activity GO:0005700 polytene chromosome GO:0005737 cytoplasm |
| InterPro families | IPR019495 Exosome complex, component CSL4 |
| Orthology group | MCL14109 |
Nucleotide sequence:
ATGGAGACTGAAACCATGAAGGAAGTTGGCAAAATATGTATCCCGGGAATGAGGTTAAGT
TCATCAGACAAAGGTCATTTAGCCGGACCGGGAACTTATGAATTAAAAGGTTATATCTAT
TCAATGTTGACTGGAGTGTTAAAAACCGAAGAAGATGAAGAAAGGAAGGCGACAAGAATA
TGTGTAGTTAGTCCAAGGACACCAAGTGTACTGCCAGTAACAGGGGATATTGTCACAGCT
AAAGTAACTGTAGTTAATTCAAGACAAGTGAATTGTATCATTCTCTGTGTAGGTCCATCT
CCTCTGGTCAGGCCTTATAGAGGAATCCTCAAAAAGGAAGATATAAAATTCACAGATAAA
GATAGAATAGATCCATATAAATGTTTCAGACCAGGCGACATTATATTGGCAAGAGTTTTG
CCCATGACTGAAATACATTGGTATCATCTGTCTACTGCGGAAAATGAACTTGGAGTGGTG
ATTGCAACTGCCGAGGGTTCACCTCAAGGAATAAGTATGGTGCCTATAAGCTGGTCTGAA
ATGCAATGTCCGAAAACTCTTGCTAAAGAACCTAGAAAAGTGGCCAGAGTTATACCGGAA
AATATAAACCAAGCTCTATTTCCAGTGGATTCTAAGGAACCACAGAAAGAAAATGGCATT
GGAAATAAATAG
Protein sequence:
METETMKEVGKICIPGMRLSSSDKGHLAGPGTYELKGYIYSMLTGVLKTEEDEERKATRI
CVVSPRTPSVLPVTGDIVTAKVTVVNSRQVNCIILCVGPSPLVRPYRGILKKEDIKFTDK
DRIDPYKCFRPGDIILARVLPMTEIHWYHLSTAENELGVVIATAEGSPQGISMVPISWSE
MQCPKTLAKEPRKVARVIPENINQALFPVDSKEPQKENGIGNK