| New model in OGS2.0 | DPOGS200600 |
|---|---|
| Genomic Position | scaffold168:- 5443-10062 |
| See gene structure | |
| CDS Length | 1728 |
| Paired RNAseq reads | 2160 |
| Single RNAseq reads | 4980 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011316 (4e-15) |
| Best Drosophila hit | Slu7 (2e-156) |
| Best Human hit | pre-mRNA-splicing factor SLU7 (9e-142) |
| Best NR hit (blastp) | unnamed protein product [Heliconius melpomene] (0.0) |
| Best NR hit (blastx) | unnamed protein product [Heliconius melpomene] (0.0) |
| GeneOntology terms | GO:0005681 spliceosomal complex GO:0000398 nuclear mRNA splicing, via spliceosome GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0007052 mitotic spindle organization |
| InterPro families | IPR021715 Pre-mRNA splicing Prp18-interacting factor |
| Orthology group | MCL12176 |
Nucleotide sequence:
ATGACAACTGGTACCCGAGTGGCGGTCTCACAAATTTTGCGAAATAAAGACGACACTGGT
GACGAAGAGGATGAACCTAAAAAGAAATCTCGTGAGGATTGGAGAAAGGCTAAAGAGTTG
GAGGAGGCTCGAAAAGCCGGAACAGCCCCAGCTGCTGTTGATGAAACAGGCAAGGACATA
AACCCTCACATACCTCAGTACATTTCCTCTGCACCTTGGTATTATGGTACAGCCGGTCCA
ACTCTTAAACATCAAAGGCCTCAAGAGGATAGAGAAGCAGAATTCACTAAACTTGACACA
TATTACAATAAAGGAGTCACTGGTTATGCCGCCACCAAGTATAGAAAGGGAGCCTGCGAG
AACTGTGGTGCGATGACGCACAAGAAAAAGGATTGCTTGGACAGACCGAGAAAGATTGGG
GCAAAATTCACTAATGTCGGCATAGCTCCGGACGAGTTCAGTCAACCGAATCTCAATCTC
AGTTACGATGGCAAAAGGGATAGGTGGAACGGATACAATCCAGAACAACACAAGGCCATT
ATAGAGGAATATCAGAAAGTTGAAGACGCCAAGAGAGAATTACGAGCGGAAAAACTAGAA
CAAGACCCGACAGCGACGGAGGAAGATGATCGGGAGGGTGAGGACGAGGATAAATATGTT
GATGAAGTGGACATGCCGGGGACTAAGGTGGATTCAAAACAACGAATCACAGTCCGTAAT
CTCCGTATTCGTGAGGACACAGCCAAATACCTCCGGAACCTGGACATCAACTCAGCCTAC
TACGATCCGAAGACACGTTCCATGAGGGACAATCCAAATCCGAATGGTGATGAGTCAGAG
TACGCCGGTGAAAACTTCGTCCGTTTCAGCGGAGACACTCGCTCCCATGCAAGTGCCCAG
TTGTTCGCATGGGACGCTCATCACAGAGGTCTGGATGTACACCTGCTGGCTGAACCCACC
AAGTTACAGCTGCTCCAGAAAGAGTACGACGCTAAAAAGGAACAGTTCAAAACACAGGTG
AAACAATCCGTGCTAGACAAGTATGGTGGTGAAGAGCATCTGAAGGCTCCTCCGAAGGAA
CTGCTCTTGGCTCAGAGCGAGGTGTTCCTCAGATACAACAGGGACGGCACCCTGGCTTCA
GATGTTGAGAAACAACTGGCCAAGAGCAAATATGAAGAAGATGTTCTGATCAACAATCAC
ACAAGTGTCTGGGGTTCCTACTGGAGGGATGGACAGTGGGGATATAAGTGTTGCCACTCC
TTTATAAAGATGTCTTACTGTGTCGGCGAAGCGGGAAAATCTGTTGTATCTGGACACGTG
GCGGATGTTCAAGATCCAGATAAGAGCTTGGGAAGTAAAAAAGACAAAGAAGACAAAATT
GTAAAATCTGCATCTGAATCGGACTCGGAGAGCAGTTCGTCTTCATCAGAAGAAGAAATA
AGAAGTAAAACAGAGAAAACCAGCAAAAAGAAGAAAAACAAGAAGAAAGCTAAGAAGAAG
AAGAAGACGGAAAAGAAAGAAGACAAAAACGAAGATAAGTTAAAGAAGGCTCTTGAGATG
GAAGAACGCAATCAGCGTAACGCTGATCGTCTGCTATCAATGGATGAAAGGAAACGTCCC
TATAACAGCATGTTCGATGTGAAGGAGCCGAGCCAGGACGAGCTGGAAGCTTACATGATG
AAGAGGAAGCGAGACGAAGATCCGATGTTACAGTTCATGAATAATTAA
Protein sequence:
MTTGTRVAVSQILRNKDDTGDEEDEPKKKSREDWRKAKELEEARKAGTAPAAVDETGKDI
NPHIPQYISSAPWYYGTAGPTLKHQRPQEDREAEFTKLDTYYNKGVTGYAATKYRKGACE
NCGAMTHKKKDCLDRPRKIGAKFTNVGIAPDEFSQPNLNLSYDGKRDRWNGYNPEQHKAI
IEEYQKVEDAKRELRAEKLEQDPTATEEDDREGEDEDKYVDEVDMPGTKVDSKQRITVRN
LRIREDTAKYLRNLDINSAYYDPKTRSMRDNPNPNGDESEYAGENFVRFSGDTRSHASAQ
LFAWDAHHRGLDVHLLAEPTKLQLLQKEYDAKKEQFKTQVKQSVLDKYGGEEHLKAPPKE
LLLAQSEVFLRYNRDGTLASDVEKQLAKSKYEEDVLINNHTSVWGSYWRDGQWGYKCCHS
FIKMSYCVGEAGKSVVSGHVADVQDPDKSLGSKKDKEDKIVKSASESDSESSSSSSEEEI
RSKTEKTSKKKKNKKKAKKKKKTEKKEDKNEDKLKKALEMEERNQRNADRLLSMDERKRP
YNSMFDVKEPSQDELEAYMMKRKRDEDPMLQFMNN