| New model in OGS2.0 | DPOGS209281 |
|---|---|
| Genomic Position | scaffold3540:- 2010-4177 |
| See gene structure | |
| CDS Length | 798 |
| Paired RNAseq reads | 163 |
| Single RNAseq reads | 993 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001723 (1e-17) |
| Best Drosophila hit | CG15269 (8e-10) |
| Best Human hit | zinc finger protein 662 isoform 2 (2e-12) |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (6e-47) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (3e-49) |
| GeneOntology terms | GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0001666 response to hypoxia GO:0001822 kidney development GO:0003676 nucleic acid binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005622 intracellular GO:0005634 nucleus GO:0005730 nucleolus GO:0006355 regulation of transcription, DNA-dependent GO:0007576 nucleolar fragmentation GO:0008270 zinc ion binding GO:0016565 general transcriptional repressor activity GO:0046872 metal ion binding GO:0051593 response to folic acid |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGTTTTACTGTTCCTATGTTAGTATACACTATATTATCTGTGAATGCGGCGATACTTTC
CCAACGGAAGATGAATTGAAGGAGCATCTTAAAACAGAACACAATAATAAATTGAGGATA
GAAAGAAACGAATATAGATGTGACACGTGCGACAAGATCTTCGGCAGTGAGAAGGCCTGT
CTGATTCACCAGCGAGTCCACACGAACCCTCGACTTCGACGTGACCGCGAACTCGACAAG
AAAAAATATTATACACTCAAGAATATCGTCTGTGAAGTGTGCGGCAAACAATATGCTTCG
AACGCTGCTCTGCGCTACCACCAGCGAGTCCACACCGGGGAGAGACCATACCGCTGCTCC
ATGTGTCCGAAAAGTTTCACTATGCCCCTGTTCCTACAGTATGCATCCAAAAGATTTTAT
ACCTCTGATGTTCCAGATTCATACTCGAACTCACACAGGGGAGAGACGGACCTTTTTAAC
CGCGTCTTGAACACTGGGACTATGCCACATCAGTGGCGTTATAGTTACATTACCCCTATA
TACAAAGGCAGGGGCAGTGTTCAAGATTGTGGTAGTTATAGGGGCGTTAAGATCATGAGT
CACACCATGAAGCTCTTTGAGCGTATGATCGACCTCAGGCTCCGCCGAGAGTGTACTGTC
TCGGAATGTCAATATGGATTTCAGCCAGGATCGGGCACCTTGGACGCCATCTTTGCCATC
AGAACTCTGATGGAGGCATACAGGGAAAAAAAGGAGAGCTCTGCATGTCGCATTCCTAGA
TCTGCAGAAGGCCTTTGA
Protein sequence:
MFYCSYVSIHYIICECGDTFPTEDELKEHLKTEHNNKLRIERNEYRCDTCDKIFGSEKAC
LIHQRVHTNPRLRRDRELDKKKYYTLKNIVCEVCGKQYASNAALRYHQRVHTGERPYRCS
MCPKSFTMPLFLQYASKRFYTSDVPDSYSNSHRGETDLFNRVLNTGTMPHQWRYSYITPI
YKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAI
RTLMEAYREKKESSACRIPRSAEGL