| New model in OGS2.0 | DPOGS203388 |
|---|---|
| Genomic Position | scaffold6:+ 464579-465827 |
| See gene structure | |
| CDS Length | 1110 |
| Paired RNAseq reads | 18 |
| Single RNAseq reads | 52 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002083 (2e-130) |
| Best Drosophila hit | actin 57B, isoform A (2e-61) |
| Best Human hit | actin, cytoplasmic 2 (5e-61) |
| Best NR hit (blastp) | beta-actin [Myxobolus cerebralis] (1e-67) |
| Best NR hit (blastx) | actin [Monosiga brevicollis] (8e-66) |
| GeneOntology terms | GO:0005200 structural constituent of cytoskeleton GO:0000902 cell morphogenesis GO:0015629 actin cytoskeleton GO:0017022 myosin binding GO:0005515 protein binding GO:0005524 ATP binding GO:0000166 nucleotide binding GO:0005198 structural molecule activity GO:0005856 cytoskeleton GO:0032010 phagolysosome GO:0001891 phagocytic cup GO:0032009 early phagosome |
| InterPro families | IPR004000 Actin-like |
| Orthology group | MCL39635 |
Nucleotide sequence:
ATGGCTTTTGAAAAACCAGCTGTTGTTCTTGATAACGGTAGTTACTATATTAAAGCTGGG
TTTGCTTGTGACAATCATCCTGTTGCAATATTTAGATCAATGGTTGGGAGGCCAAATTTT
TCACAGAGAAGTCTAGGTCAAGAATATTATGACATATTTATCGGTGACGAAGCTATTGAG
AGAGTAGAAGACTTGGAATTATGTCACCCGATAGTAGAGGGAAGGATTGTCCATTGGGAT
AATATGGAAAAAATTTGGCATCATGTATTTTATAGAGAATTAAAAGCGGCACCTGAAGAC
CGAGCTGTTATTTCAGCATGTGGTCCCACAGTAGATATTACAGAAAAAATAAAGTGCTGT
GAAATATTTTTTGAGACCCTTAACTCTCCGGCATTATGTATACAGCCACAGTGTTCTTTG
GCAATGTACGGTTCTGGAACTACCACTGGACTATGTGTGGATATCGGACACGCCACTACA
GATGTTATACCCATTTTTGAGGGAGGAATGATGAAATACGCTCACATGAAAACAAATTTG
GCAGGAGTGCAAATAGCAGATTTCATTAAAAAAAGTTTATTGGATCGCAGTGGTTCGCAT
ACAATCAAGTCCCCGAGCACTTTAGAGGACGTTATCAAAAACTGTTTATATGTAACAAGG
AACTGTGCTGTCACCCGAAAGCAATATCTCAAAAAGTACACATTGCCTGGTGGTGAAGAA
ATAGATGTCAGTCATGAGGCTTTTATGGCATCAGAACTATTATTTCAACCGGATCTCGTT
AAAGGCGAAGCTACTGATTTTTTACCGTTGCATGAAGCTGTTATTACGTCTGCTTTGAAA
TGTGATGATGAGTTAAGGTTAGAATTATACAACAACATAGTTCCTTGTGGTGGATTGGCT
ACGATTCCAGGGCTTAACGAAAGATTGGAACTAGAGATTGTTAAGCAAGTTGATAAGCCC
ATCGCAATACTGTCTTCACCAGAAGCATATGCTGTAGCTTGGTTAGGCGGAGCCACGTTC
GCAGGGCTGGGTGATGCCCAGAAAATGTGGATATCCAAAAAACAATTTGAAGAATATGGG
GAAAGAATTGTGAGAAATAAATTTTTATAA
Protein sequence:
MAFEKPAVVLDNGSYYIKAGFACDNHPVAIFRSMVGRPNFSQRSLGQEYYDIFIGDEAIE
RVEDLELCHPIVEGRIVHWDNMEKIWHHVFYRELKAAPEDRAVISACGPTVDITEKIKCC
EIFFETLNSPALCIQPQCSLAMYGSGTTTGLCVDIGHATTDVIPIFEGGMMKYAHMKTNL
AGVQIADFIKKSLLDRSGSHTIKSPSTLEDVIKNCLYVTRNCAVTRKQYLKKYTLPGGEE
IDVSHEAFMASELLFQPDLVKGEATDFLPLHEAVITSALKCDDELRLELYNNIVPCGGLA
TIPGLNERLELEIVKQVDKPIAILSSPEAYAVAWLGGATFAGLGDAQKMWISKKQFEEYG
ERIVRNKFL