| New model in OGS2.0 | DPOGS203399 |
|---|---|
| Genomic Position | scaffold6:+ 842886-857202 |
| See gene structure | |
| CDS Length | 4053 |
| Paired RNAseq reads | 513 |
| Single RNAseq reads | 1459 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012297 (0.0) |
| Best Drosophila hit | SCAP (0.0) |
| Best Human hit | sterol regulatory element-binding protein cleavage-activating protein (2e-135) |
| Best NR hit (blastp) | PREDICTED: similar to SCAP CG33131-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to SCAP CG33131-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0000042 protein targeting to Golgi GO:0035103 sterol regulatory element binding protein cleavage GO:0016485 protein processing GO:0016021 integral to membrane |
| InterPro families | IPR019775 WD40 repeat, conserved site IPR011046 WD40 repeat-like-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR000731 Sterol-sensing domain IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL14706 |
Nucleotide sequence:
ATGGCAGGGTCTACATTACCCGAAAAGGTTGCGCAAATATATTACACGTATGGTCTTTTC
TGCTCATCTTACCCTGCAGTTGCGGTCGCGCTAGCACTCTCTGTCGTCTTGTTCTGCTGC
TATCCACTTCTAAATGTACCACTACCAGGAAACATACCAGTTGTAATTAATATACATAAC
AAGGATCACCACAAAGTAGTGGACTGCAATGCAAATTGTGATTTTTCAGCAACATCAGTA
CAATTACAGTTTTTGCACAATGAAACACAAAAACTTCCACATGTGTGGGTGAAAGATAAA
CCGCTTCTTTATGTACATCAAATTATTATGAGAATAGGTGTGTCACCTTGGAATGACAAT
CTTAAAATGTGGGATGCGTTCCGTGCACCCCTTCAAGAGACATTTCGTTTACTTGAGGCA
GTGAGGAATCATGAAGATCCGGAAACAAAAGAAACTCTGTTACAACACTGTTACCAAGTG
GAAGGTATAAAGAGATCTGATAAGGCCACTGTTGAGACGGTACTGCCAGAATATAGCTGT
CTCATTCTATCACCGGCTAATCTATGGCAACAGAATATAGACTCGTTCTCCCTTGATACA
AACATAGTGAACACAGTTTATACTTATCAGGGACTTCAAAAGGGCAAGGTATCAATCGCT
GAGATGGCCTTCGGCTTGCAACTGCGGGACACCGGCATCAAACGTTACCCGCTCAGAGCG
AGGCCGAGGGTCTTACAATACGCTGTAACACTCTTCTATCAACATGCTGATGATAAGTTC
ATCAATTCCCTGACGAAGAAGCTCCGCGATATGTATCCCCTGTACCAGGACACTTCCCAG
GCCTACACAGACGATATGACGCTCATATATTACCCGGGAAAGTTCAACTACCATGAACTG
GTGCAGCTGATGATAACGTTCGTGGGTCTCTTCCTGTACGTTTATTTTTCGGTACGGAAG
ATTGAGTTCATTAAGTCCAAACTGGGCTTAGCAGCGTGCGCTGTCCTCAGTATAGCCGGC
AGTCTTACAATGTCCACGGGAATATGCTTCTTCTTCGGTTTCTCTCTGAGCTTACAAGGG
AAAGAAATCTTTCCGTATCTGGTGATAATAGTCGGGCTCGAGAACGTTCTGGTGCTAACC
AAGAGCGTAACGTCGACGGATTCAAGATTGGACGTCAAAATCCGTCTAGCCCAAGGCCTC
AGTAAGGAAGGATGGTCCATAACGAAAAATCTCCTCACAGAAATAACAATACTGACAGTC
AGCTTCTTCACTTTCGTACCTTTCATACAGGAATTCTCAATTTTCATGATAGTCAGCCTA
TTAACAGACTACTTCATACAAATGGTGTTCTTCGCTACGATCCTCGGCATAGACGTGCGC
AGAATGGAGTTCTATCCTGAGCGCAATTCAAAATTGCACTTGAAGGATTATTTCAATTCG
AATAACGCTCTCAACTGGCGTTTCCACAGAGGTTATTCTGATGATAGTAGTTCACCACAA
AGAATGACGAAATCCAAGTCCCATCCGCGGCTCAACGGCCTCGTTCAGACAAGTCCGACT
GATGTTGTGGCCCAACGGAATCCGAGCCCCGGTTGTCAGGACCACAGAGTTCCTAAACGT
ATATGGCTTGTGAACATGTGGGCTAGAACACGGCTATTTCAACGAGCTTTCATGGTTTGG
ATGCTAGTGTGGATATCTATGATAGTGTATGACTCCGGTGTCGTAGATTATTTCATAGGC
AGTGTTGAGAACAATGAAATTAACACAGTGCATAGAAAGAATATAAGGAACGAGCCAAAG
CAGTCCGTGTATATGACATACAATAATGTGAACAGTACGGGAAGACATCCGCTCGTGTTC
TCACCGCTCCTCGATACCTCCGATACAGAGAAGATCGCCATAGCTGCTAACGAGACGATA
CTATTGAAACACTCGCCATTACATCGACCGTTTTCGAGGGTGTCCCCGTACCATTGGTCC
TCGATCCTGTCTCAGTACAATGAGTCGGTTGCGGGTAGATACGTGGCTATTCTGCCGCCG
GTGCTAGTTAGTCATCGAGTTGGACCAGAAGTGGCGGTAGGGTTGAGGCATCCCGATGAA
AAAGATCCGCCCCCGCTGAGGTGGCAGGCTCTGGCCGCTGCCTTGGATCCCATAGATACT
TTACCAGAATTTGACCTCAAAGACGGTAAAGCACAGGCTCATCAGTTGGGGCAAAGTGCT
GATTTGCCAATTTACCCCACAACTCCCATGGAAATATTACTCCTGGCCATACTCTGTACC
ATAAGTGTGGCTGTCATAGCATATATGATGGTAGTCCTATACAGATGCGTTTGTTCGCGC
CACTACGCAGAATGGAGGGCGTCCTGGAACGATGACAACTGCCATAATAAGATCATAGCC
AAACAGCCGGCTGTTCAGCTAGTGATGGAGGCTGTGCCGTTGGTGGTGGCCGGTCACAGT
CAGGAGGTGGAGTGTCTGGTGACGGATGGTGAGAAGGTGGTCAGTTCCTGTCTCCAGGGA
AACATCCGCGTATGGGACTCCCTCAACGGTGACCTCATCACTAATATCGATAGAAGCGCA
TACTTCAAACTTCAATCAGAGTTGTTTGACAGAGTCCACAGTAAAGCGAATTCCTCTGAT
GAGCATATTACTATTGAAGCATGCAAAAGTCCTGAAGATGTTACCCAAAAACAAAACACC
GGACCAAGATTGCGGCGACCTCTGTCCACTCATTTGAGTAATTTACAGTTCAAGCAGAAC
AACAGCACCGATACCACTTATCTACCAGTATCTGAGAGCACCAAGTATGATTTCGCAAAG
GCCTACAGAGATTTGTATCACACTGAACCAAATATATATGATGTCAGTGACAGCTACAGT
AGTTTGATTACAAGAGACAATGAAGATGTAAGTGCGTTTAAACCAAAAACCAAAAGTGCT
GTGAATAGTGTTAGTATGGATTTTGGTAGGAGTGATGGGTCAGATAATACTGGTGCTAGT
TGGAGGGATCAGGCTCTGATGGACACCCCAGTGTGGTGTATGGACTTTTGTAATGATCTT
ATCATACTTGGCTGTGCCGATGGCAGGCTGGAGTTCTGGGAGGCCAGCACTGGAAAGTTG
ATGTGTGTGTATCAATCGTCAATGGCTGGTGTGAGTCACGTCCGTGTGCTGTCTTCCGGC
AGGCGGGTCCTGGCCGCCAGTCTAACTGGACACCTCTCTCTCCTAAGACTGGACGCTTGC
ACCAGCTCGGGAGCTCACGTCGACTGGCGCTTCAGCACCGCTCATAGACGAACTCACAAA
CGGACGGGTTCCGCTGAGTTACTAAGAACCGGCAGCGGGTTCAATGAAAACCGCAAGAGC
TTTTCATACGACGCTGACAACAATAACGACGAAGTAGTTTGCGTCCGCGTAGCTCACTGC
AGGGCGCACCAGCAACCTATAACTGAACTCCAATCCGAGGGCGGGCGGGTACTTACCGGA
GGGCAGGACCACGTGCTCAAGGTGTTCTCAAGTTCGGAGCTGACCGCCCTGTTGACGCTT
CACGGACATTGCGGCCCCATAACCAGTTGTTTCATAGATCACGCGACGCCCACGATCGCC
GGCAGCGGTTCCCAGGACGGTTTACTATGCGTTTGGGATCTTCATACAGTTGTCTGTATG
CATACAATCGAAAGTATTTTTGAAGAGTCGATGTCTTTTTTAGCTGCTACCTCATATCGA
GACGAACGACGAGACCTTTGTGTGCTGTCTGTTGATAATAAAATATTTAGTTTACACTCG
ACCTTACGGCTACGTGGTCTGAACTACATGAGTCGAATGCTGCCTCTCACTCACACACTG
CTTGTGATGGGTGACCGCAGCGGATTGACAGCATACGATCTTAGCAGCGGGGATATTATA
CGAAGAGTCATGTTTGTTACAGGCCAGAGCGACGGCTGTATATTCGTACGTCAGATACTC
CCGCTAAAGGACGCCATAGTCTGTGACTACGCGAACCAGCTTAGAATAGTCCGCTTCCCC
TTAGTGTCGAAAATGGATATGAAGAATGAATAG
Protein sequence:
MAGSTLPEKVAQIYYTYGLFCSSYPAVAVALALSVVLFCCYPLLNVPLPGNIPVVINIHN
KDHHKVVDCNANCDFSATSVQLQFLHNETQKLPHVWVKDKPLLYVHQIIMRIGVSPWNDN
LKMWDAFRAPLQETFRLLEAVRNHEDPETKETLLQHCYQVEGIKRSDKATVETVLPEYSC
LILSPANLWQQNIDSFSLDTNIVNTVYTYQGLQKGKVSIAEMAFGLQLRDTGIKRYPLRA
RPRVLQYAVTLFYQHADDKFINSLTKKLRDMYPLYQDTSQAYTDDMTLIYYPGKFNYHEL
VQLMITFVGLFLYVYFSVRKIEFIKSKLGLAACAVLSIAGSLTMSTGICFFFGFSLSLQG
KEIFPYLVIIVGLENVLVLTKSVTSTDSRLDVKIRLAQGLSKEGWSITKNLLTEITILTV
SFFTFVPFIQEFSIFMIVSLLTDYFIQMVFFATILGIDVRRMEFYPERNSKLHLKDYFNS
NNALNWRFHRGYSDDSSSPQRMTKSKSHPRLNGLVQTSPTDVVAQRNPSPGCQDHRVPKR
IWLVNMWARTRLFQRAFMVWMLVWISMIVYDSGVVDYFIGSVENNEINTVHRKNIRNEPK
QSVYMTYNNVNSTGRHPLVFSPLLDTSDTEKIAIAANETILLKHSPLHRPFSRVSPYHWS
SILSQYNESVAGRYVAILPPVLVSHRVGPEVAVGLRHPDEKDPPPLRWQALAAALDPIDT
LPEFDLKDGKAQAHQLGQSADLPIYPTTPMEILLLAILCTISVAVIAYMMVVLYRCVCSR
HYAEWRASWNDDNCHNKIIAKQPAVQLVMEAVPLVVAGHSQEVECLVTDGEKVVSSCLQG
NIRVWDSLNGDLITNIDRSAYFKLQSELFDRVHSKANSSDEHITIEACKSPEDVTQKQNT
GPRLRRPLSTHLSNLQFKQNNSTDTTYLPVSESTKYDFAKAYRDLYHTEPNIYDVSDSYS
SLITRDNEDVSAFKPKTKSAVNSVSMDFGRSDGSDNTGASWRDQALMDTPVWCMDFCNDL
IILGCADGRLEFWEASTGKLMCVYQSSMAGVSHVRVLSSGRRVLAASLTGHLSLLRLDAC
TSSGAHVDWRFSTAHRRTHKRTGSAELLRTGSGFNENRKSFSYDADNNNDEVVCVRVAHC
RAHQQPITELQSEGGRVLTGGQDHVLKVFSSSELTALLTLHGHCGPITSCFIDHATPTIA
GSGSQDGLLCVWDLHTVVCMHTIESIFEESMSFLAATSYRDERRDLCVLSVDNKIFSLHS
TLRLRGLNYMSRMLPLTHTLLVMGDRSGLTAYDLSSGDIIRRVMFVTGQSDGCIFVRQIL
PLKDAIVCDYANQLRIVRFPLVSKMDMKNE