| New model in OGS2.0 | DPOGS202805 |
|---|---|
| Genomic Position | scaffold192:- 132061-133791 |
| See gene structure | |
| CDS Length | 1392 |
| Paired RNAseq reads | 45 |
| Single RNAseq reads | 124 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010451 (2e-22) |
| Best Drosophila hit | dachsous (6e-176) |
| Best Human hit | protocadherin-16 precursor (4e-105) |
| Best NR hit (blastp) | dachsous [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | dachsous [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0018149 peptide cross-linking GO:0000904 cell morphogenesis involved in differentiation GO:0008283 cell proliferation GO:0005886 plasma membrane GO:0016021 integral to membrane GO:0004872 receptor activity GO:0005887 integral to plasma membrane GO:0007156 homophilic cell adhesion GO:0050839 cell adhesion molecule binding GO:0016339 calcium-dependent cell-cell adhesion GO:0004871 signal transducer activity GO:0042067 establishment of ommatidial planar polarity GO:0001737 establishment of imaginal disc-derived wing hair orientation GO:0016318 ommatidial rotation GO:0045317 equator specification GO:0045198 establishment of epithelial cell apical/basal polarity GO:0007164 establishment of tissue polarity GO:0001736 establishment of planar polarity GO:0005509 calcium ion binding GO:0035222 wing disc pattern formation GO:0030010 establishment of cell polarity GO:0007480 imaginal disc-derived leg morphogenesis GO:0007476 imaginal disc-derived wing morphogenesis GO:0048592 eye morphogenesis GO:0016337 cell-cell adhesion GO:0035159 regulation of tube length, open tracheal system |
| InterPro families | IPR015919 Cadherin-like IPR020894 Cadherin conserved site IPR002126 Cadherin |
| Orthology group | MCL10052 |
Nucleotide sequence:
ATGAACGTGGAATTTTCGGAGAATACTCCTAGGGATGTAAAGAGGAAGTTAAATCCAGCC
AAAGACCAGGATTTAGGAGTGTTCAATACGCAGAGATACAATATTGTATCCGGAAATACC
GATAATGCGTTCAAACTGTCTTCACACAGAGAAAGGGATGGCGTCTTATATTTGGATCTC
CAAATTAATGGTTTTCTTGACAGAGAAACGACAGACCACTATGAGTTAGTGATAGAAGCT
CTAGATGGAGGCACTCCACCTCTTAGAGGGACGATGACTGTAAATATAACAATTTTAGAT
GTAAATGATAATCCTCCTGTGTTCGCTGAAAGTGCATATTCAGCGATGATACCAGAAAAC
GCAACAGTCGGTACCACAGTACTGAAAGTGTTTGCGATAGACTCAGACGAAGGTGAAAAC
GGTGTGATAGAATACTCAATAAATAGGAGACAAAGTGATAGAGACAATATGTTCAAAATA
AATCCAGATACAGGTGAAATTATTGTAAATAAACTCTTAGATTTCGAGACCAAAGAACTT
CACGAGTTAGTCGTCGTCGCTAGAGATAAGGGTGCTCAGCCTCTAGAGACCACTGCGTTC
GTGTCAATACGTGTCACCGACGTTAATGATAATCAGCCCACAATAGATGTTATCTTCTTA
AGTGACGACGCCACACCTAAGATATCAGAGTCCGCTCAGCTGGACGAGTTCGTAGCAAGA
ATATCTGTTCACGATCCGGATTCTAAAACCGAATACGCCAATGTCAATGTTACTTTGAAC
GGTGGCGACGGACACTTCGATTTACGGACGCATGATAATATAATTTATTTAGTTGTGGTA
GCTTTGCCTCTCGATAGAGAATCTCAGTCCGCTTACACTTTAAACGTAGTAGCCACTGAC
AAAGGTTCGCCTCCGCTACACGCGTCTCGTATCATAACTCTCTTGGTGACGGATATAAAT
GATAATCCCCCAACTTTCCTTGAGAGCGAGTATAAAGCAAATGTCCCAGAAGCAGCAGCA
CCCGGTACTCCTGTGCTGCAGGTGTCCGCTTTCGATGCTGATGAAGGAGAGAATTCCGAA
ATAAGGTATTCCATACTCCCATCACCGCAATCCGATTGGTTTTCTATTGATGAGCGTTCT
GGTCTGGTTACGACACGTGTTCGCGTTGATTGTGAAACAAATCCGATGCCTAAGTTAACG
GTAGTGGCGAGTGATCGCGGCAATCCTCCTTTGTCGTCCACCGCGACCTTGTTAGTGACA
GTGCTAGATGTAAACGACAATGAGCCGATCTTCGATCAGTCCTTCTACAACGTGACCGTT
CCAGAGAATGAAGCCGTCGGCAGCTGTATTCTAAAGAACGTAGAACCTTATGGAGTGACT
ACTGACTACTGA
Protein sequence:
MNVEFSENTPRDVKRKLNPAKDQDLGVFNTQRYNIVSGNTDNAFKLSSHRERDGVLYLDL
QINGFLDRETTDHYELVIEALDGGTPPLRGTMTVNITILDVNDNPPVFAESAYSAMIPEN
ATVGTTVLKVFAIDSDEGENGVIEYSINRRQSDRDNMFKINPDTGEIIVNKLLDFETKEL
HELVVVARDKGAQPLETTAFVSIRVTDVNDNQPTIDVIFLSDDATPKISESAQLDEFVAR
ISVHDPDSKTEYANVNVTLNGGDGHFDLRTHDNIIYLVVVALPLDRESQSAYTLNVVATD
KGSPPLHASRIITLLVTDINDNPPTFLESEYKANVPEAAAPGTPVLQVSAFDADEGENSE
IRYSILPSPQSDWFSIDERSGLVTTRVRVDCETNPMPKLTVVASDRGNPPLSSTATLLVT
VLDVNDNEPIFDQSFYNVTVPENEAVGSCILKNVEPYGVTTDY