| New model in OGS2.0 | DPOGS212093 |
|---|---|
| Genomic Position | scaffold1667:+ 5088-7261 |
| See gene structure | |
| CDS Length | 1725 |
| Paired RNAseq reads | 290 |
| Single RNAseq reads | 926 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006726 (6e-114) |
| Best Drosophila hit | death related ced-3/Nedd2-like protein, isoform D (2e-25) |
| Best Human hit | caspase-3 preproprotein (2e-20) |
| Best NR hit (blastp) | death related ced-3/Nedd2-like protein [Bombyx mori] (2e-124) |
| Best NR hit (blastx) | death related ced-3/Nedd2-like protein [Bombyx mori] (3e-122) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0006915 apoptosis GO:0016505 apoptotic protease activator activity GO:0050829 defense response to Gram-negative bacterium |
| InterPro families | IPR002138 Peptidase C14, caspase non-catalytic subunit p10 IPR001309 Peptidase C14, ICE, catalytic subunit p20 IPR015917 Peptidase C14, caspase precursor p45, core IPR002398 Peptidase C14, caspase precursor p45 IPR011600 Peptidase C14, caspase catalytic |
| Orthology group | MCL15239 |
Nucleotide sequence:
ATGATATTATATAAAAGTGTTTTTCATAACATTGAATACTTAGTGAGTAGAAAAATTATT
TATATTTTCAATTCAAATATTCCGCAAACTAATTGTTTGACAATGTTGCGTTCTGATGCC
CAAACAGAAAATGATAACAATAACATATTTCGTAGTATTAACAATCTACGTGTCGACATA
ATTTTGGAAATACAAAAAGATATTGATCCTTATGATATGGTTTCTTTGGTGTTTTTATTG
TACGAAACCCCAGACACGGCTCTTCAGCGATTAATTGTTTATCAGAGGCTATCTAACGAT
GAAGCACGCCATAGTGTAAACTTGCTCTATGACTGGGCACTTCATGCACAATCACGCCAA
ACATGGAAGTATGAATTTCTGGAAGCTTTAACTATTTGTAGATTATACAATATTATAAGA
AAACTTGGATTTGATGTCTCACAAATTAGGAAACACTACTTACCGGACAACCTCAATGTT
AGCATTTATACAGATCCCATGAAGAAGGTTCTGTATAAACTTTGTGAAAGTTTAAATTCT
GAAATATTTTCTAGATTGCAAAAGACACTTATATCATACAATTATAATGTATCTGAATAT
AGAACATGTGAATTAGTTTTACTGGAACTAATATCAAAAAGGTTTATTAAATTGGGATAT
TATGATAAAGACAAAAAATCTTACACCAATACCTATGATATTGAAGAGCTTGCGAAAATT
ATTGAAAAATTTTCAACGGTCAGTATATTAGCATCAGTCTTAAGGGAAATACAAGAGCAA
ATAAATTCACCAAACTTAAAAAATAAACCTCAGAACTTTACTAGTATAGAAACATACAAC
ATTCCTGGACCATCAAAAATCAAAGAAGACAAATATCAAGAGGGCTTTGATGAGATATTT
GAGCTGATGAACCAATGTCACAATGACGAAAATGAACCTGGGGCTAATTTCAAATCTGAC
ACAATGCTATTAAAAGATGCATATGTTATAAAAAATAGAAAAAGAATCGGTGTGTGTTGC
ATAATAAACCAAGACAAGTTTTATCCTTCGAAACAAAGCCTACAAAACAATGAACACATT
GATTTAGAAGACCGTTTGGGTTCTAGGTTGGATCTTATGGCTTTAGAGAGAACTATGACG
TCATTGAATTTCAAAGTAAAAAGTAAATCTAACTTAAATCATGAAGAAGTTTTTCAATTT
ATAAAAGATGTCTTGAAATATCATGTCACAGCTGAAGATAGCGTTTTTATGCTGTGTATA
CTTTCTCATGGTGTAAGAGACCATGTTTATGCAGCAGACTCGGTAAGGGTGAAAATAGAT
GATATACAAAATCTATTAGACTCTGAACATGCCCATCATCTCCGTGGTATTCCAAAAGTA
CTCATCCTTCAAGCTTGTCAAGTAGAAACCGAGTCGGAGGTGAAAAATAAAATTGTTGCA
GACAGTCCACCTTTAAACGATTTCTATTTAAAAAAATCACATTTCTTGGTCTATTGGGCT
ACTGCTCCTGAATATGAAGCGTTCAGAATAGAAGATAAAGGATCAATATTTATCCAATGT
ATCTGTGCACTTATAAAGAAAAGAGCCAAATACGAACATCTGATTGACATTTTTACTAAG
GTGACCTATAATGTTACTGCTTTATGCACTAAACTACACAAACCTCAAGTACCACTATCT
AAATCTACTTTGACAAAAAAATTGTACTTGAGTATTCCGGAATAA
Protein sequence:
MILYKSVFHNIEYLVSRKIIYIFNSNIPQTNCLTMLRSDAQTENDNNNIFRSINNLRVDI
ILEIQKDIDPYDMVSLVFLLYETPDTALQRLIVYQRLSNDEARHSVNLLYDWALHAQSRQ
TWKYEFLEALTICRLYNIIRKLGFDVSQIRKHYLPDNLNVSIYTDPMKKVLYKLCESLNS
EIFSRLQKTLISYNYNVSEYRTCELVLLELISKRFIKLGYYDKDKKSYTNTYDIEELAKI
IEKFSTVSILASVLREIQEQINSPNLKNKPQNFTSIETYNIPGPSKIKEDKYQEGFDEIF
ELMNQCHNDENEPGANFKSDTMLLKDAYVIKNRKRIGVCCIINQDKFYPSKQSLQNNEHI
DLEDRLGSRLDLMALERTMTSLNFKVKSKSNLNHEEVFQFIKDVLKYHVTAEDSVFMLCI
LSHGVRDHVYAADSVRVKIDDIQNLLDSEHAHHLRGIPKVLILQACQVETESEVKNKIVA
DSPPLNDFYLKKSHFLVYWATAPEYEAFRIEDKGSIFIQCICALIKKRAKYEHLIDIFTK
VTYNVTALCTKLHKPQVPLSKSTLTKKLYLSIPE