| New model in OGS2.0 | DPOGS206017 |
|---|---|
| Genomic Position | scaffold1410:+ 1402-11351 |
| See gene structure | |
| CDS Length | 2481 |
| Paired RNAseq reads | 2502 |
| Single RNAseq reads | 6340 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012636 (0.0) |
| Best Drosophila hit | Nedd4, isoform H (0.0) |
| Best Human hit | E3 ubiquitin-protein ligase NEDD4-like isoform 2 (0.0) |
| Best NR hit (blastp) | neural precursor cell expressed, developmentally down-regulated 4 [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Nedd4 CG7555-PD, isoform D [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0016567 protein ubiquitination GO:0007411 axon guidance GO:0045807 positive regulation of endocytosis GO:0016199 axon midline choice point recognition GO:0005515 protein binding GO:0031623 receptor internalization GO:0019904 protein domain specific binding GO:0005112 Notch binding GO:0005737 cytoplasm GO:0045746 negative regulation of Notch signaling pathway GO:0002092 positive regulation of receptor internalization GO:0051965 positive regulation of synaptogenesis |
| InterPro families | IPR001202 WW/Rsp5/WWP IPR000569 HECT |
| Orthology group | MCL11247 |
Nucleotide sequence:
GTGACAGTACCGTCGCCAACCGGAGACGACTGGGAGTTGGTGGACGCACCAAACAATGTG
TCAGGGGAGCCGCTGCCCGCGGGCTGGGAGGAGCGCCAGGACGCTAACGGCCGTACTTAC
TATGTGAACCACGTGGCCAGGTCCACGCAATGGGAGAGGCCTACGTTGATGCGTAATATG
TCAACGGAGTCACAAGCTGAGCGTATGGAAACAGCAGCCACTGAGTTCCAAAGACGTTTC
CATATCTCGGCTGATGAAGACCGGCCTCCAGCGAGACAGGCACAGGAGGAATCGAATGAT
AGACAGCCGGACAATCCTACCGAGCACACGGCCCACGCTTCACCGATACTATCATCTGAG
ATCAGTCAGGAATCGACACAGGACGCGACACAGCACGCGACACAGAACGCGACACAGGAC
GCGACACAGGAAGCGACACAGGAAGCAACACAGGACGCGACACAGGAAGTGACACAGGAC
GCTTCGCAATCAGAAGACGGTGCACAAGCGTCCACATCAGAAACAACTCAAGAACCTGTA
CAGGATAATATAACGAAAAACTGTGATACTAATTTAAGAGACAACAAAGAAAACGACGAC
GTCTGTCAAAATGACGCGACAGGCGGAGGTGATGAAGTGGACAATGCTCAAGCAGATAAT
AATAATGCTAGTCAAGAAATTATAGAGATACAAGTGGCTGGGGACGTGGATGTAGACGGG
GAAGGGGGGATCAACGATACGGAATCAAATGGCGTTGTAGACGATGACGCGAGAACAGAG
ATCGAGGAAATCACTTTTGGGAGAGAGAGAACGCTCACAGACGAGACTGGGGGCTCCACG
GAATCTTTGACTTTTGATGAGAACCATTTCAGCACGCCCACGGGAGGCATCACGCCGGAG
AGACGGATGTCCCCGTCACGACGGCGGACGACGAACTCGCTGACGGAGTCGGAGGACGAA
ACCGACGGATCCTCGGAGAGCACTCGAAGCACCAGCTCCAGCAGCAGCCAGAGCCAGAAC
CTACCAAACAGCGACGGTCTGCCGTCCGGCTGGAGTATGCAGCGAGCTCCGAATGGAAGA
ATATTCTTCATAGATCACAACCAGAAAACTACAACATGGATCGATCCCAGAACAGGTTGC
GCGTCCAGCCTGCCCTCAGCCGCGGCGAGCGCGGAGGTGGACACGGACGAGTTGGGCGCC
CTGCCCGAGGGTTGGGAGGAGAGAGTCCACACTGATGGAAGGATCTTCTTCATAGACCAC
AACACTCGCACGACCCAGTGGGAGGACCCTCGGCTGTCCAACCCTCAGATCGCGGGTCCG
GCCGTGCCTTACTCCAGGGACTACAAACGGAAATACGAGTACCTCAAGAGTCAGCTGCGG
AAACCTAGCAACGTGCCCAACAAGTTCGAGATCAAGGTCCGGCGGAACTCGATCCTGGAG
GACTCGTACAGGATCATCAGCTCCGTCAGCCGCATCGACCTGCTCAAGACCAAGCTGTGG
GTGGAGTTCGAGTCCGAGGTCGGCCTAGACTACGGCGGTCTCGCGCGCGAGTGGTTCTTC
CTGCTGTCCAAGGAGATGTTCAACCCCTACTACGGCCTGTTCGAGTACTCCGCCATGGAC
AACTACACGCTCCAGATAAACCCGAACAGCGGCGTCTGCAACGAGGAGCATCTCAGCTAC
TTCAAGTTCATAGGCCGAGTCGCCGGCATGGCCGTCTACCACGGGAAGCTGTTGGACGCT
TTCTTCATCCGTCCCTTCTACAAGATGATGGTGGGGAAGACGATCGAGCTGCAGGACATG
GAGTCCGTGGACCTGGAGTACTACAACTCGCTCGTGTGGATCAAGGAGAACGATCCGTCC
GAACTGTATCTGACGTTCGCCGTGGACGAGGAGCAGTTCGGGAACACCATCCAGAGGGAG
CTGAAGCCGGGCGGCGCCAACATAGCGGTGGACGAGGACAACAAGGACGAGTACATCAAG
CTGGTGATCCAGTGGCGGTTCGTGAGTCGCGTGCAGGAGCAGATGTTCGCGTTCCTGGAG
GGGCTGGGGGCGCTGGTGCCGTTGCCGCTGCTGAAGATCTTCGACGAGCACGAGCTGGAG
CTGCTGCTGTGCGGCATCCAGCACATCGACGTCCGCGACTGGCGCGCCAACACGCTCTAC
AAGGGCGACTATCACGCCAACCACCTCGTGGTGCAGTGGTTCTGGAGGGTGGTGTTGTCT
TTCTCCAACGAGATGAGATCCCGTCTGCTGCAGTTCGTGACGGGCACCTCGCGCGTGCCC
ATGAACGGGTTCAAGGAACTGTACGGCTCCAACGGCCCGCAGCTGTTCACCATCGAAAAG
TGGGGCGGACCCGACAACTACCCTCGGGCGCACACCTGCTTCAACCGCATCGACCTGCCC
CCGTACGAGAGCTACATGCAGTTGAGGGAGAAGCTGGTGAAGGCTATTGAGGGCTCCCAG
GGCTTCGCTGGGGTCGACTGA
Protein sequence:
VTVPSPTGDDWELVDAPNNVSGEPLPAGWEERQDANGRTYYVNHVARSTQWERPTLMRNM
STESQAERMETAATEFQRRFHISADEDRPPARQAQEESNDRQPDNPTEHTAHASPILSSE
ISQESTQDATQHATQNATQDATQEATQEATQDATQEVTQDASQSEDGAQASTSETTQEPV
QDNITKNCDTNLRDNKENDDVCQNDATGGGDEVDNAQADNNNASQEIIEIQVAGDVDVDG
EGGINDTESNGVVDDDARTEIEEITFGRERTLTDETGGSTESLTFDENHFSTPTGGITPE
RRMSPSRRRTTNSLTESEDETDGSSESTRSTSSSSSQSQNLPNSDGLPSGWSMQRAPNGR
IFFIDHNQKTTTWIDPRTGCASSLPSAAASAEVDTDELGALPEGWEERVHTDGRIFFIDH
NTRTTQWEDPRLSNPQIAGPAVPYSRDYKRKYEYLKSQLRKPSNVPNKFEIKVRRNSILE
DSYRIISSVSRIDLLKTKLWVEFESEVGLDYGGLAREWFFLLSKEMFNPYYGLFEYSAMD
NYTLQINPNSGVCNEEHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMVGKTIELQDM
ESVDLEYYNSLVWIKENDPSELYLTFAVDEEQFGNTIQRELKPGGANIAVDEDNKDEYIK
LVIQWRFVSRVQEQMFAFLEGLGALVPLPLLKIFDEHELELLLCGIQHIDVRDWRANTLY
KGDYHANHLVVQWFWRVVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQLFTIEK
WGGPDNYPRAHTCFNRIDLPPYESYMQLREKLVKAIEGSQGFAGVD