| New model in OGS2.0 | DPOGS202043 |
|---|---|
| Genomic Position | scaffold795:+ 19591-20270 |
| See gene structure | |
| CDS Length | 312 |
| Paired RNAseq reads | 278 |
| Single RNAseq reads | 1493 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006752 (1e-05) |
| Best Drosophila hit | lethal (2) 37Cg (1e-30) |
| Best Human hit | DNA-directed RNA polymerases I and III subunit RPAC2 isoform 1 (2e-17) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000022241 [Nasonia vitripennis] (3e-31) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000022241 [Nasonia vitripennis] (9e-30) |
| GeneOntology terms | GO:0003899 DNA-directed RNA polymerase activity GO:0006360 transcription from RNA polymerase I promoter GO:0005736 DNA-directed RNA polymerase I complex GO:0003677 DNA binding GO:0005875 microtubule associated complex |
| InterPro families | IPR008193 DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site IPR009025 DNA-directed RNA polymerase, RBP11-like |
| Orthology group | MCL12988 |
Nucleotide sequence:
ATGACGATGATGAAAATATCTGAGTTGCCAGGTGACGAGGATAATGGATTGACCTGTAGA
ACTTACGTCTTTCAAAACGAAAGCCACACTTTAGGAAATGCTTTAAAATGCATCATTGAC
AGATATGAAGATGTCCAATTCTGTGGCTACACTGTCCCTCATCCAGCGGAAGCCAAGATG
CACTTCAGGATCCAAACCCAAGAAACTCCCACATTAGATATACTGAAAAGAGGCCTAACA
GACTTGCAAAAAGTCTGTGAACACACAATAGATTTATTTGAAAAGGAAGTAAAAGAATTT
AGCAAACCTTAA
Protein sequence:
MTMMKISELPGDEDNGLTCRTYVFQNESHTLGNALKCIIDRYEDVQFCGYTVPHPAEAKM
HFRIQTQETPTLDILKRGLTDLQKVCEHTIDLFEKEVKEFSKP