| New model in OGS2.0 | DPOGS213980 |
|---|---|
| Genomic Position | scaffold295:- 20777-23349 |
| See gene structure | |
| CDS Length | 834 |
| Paired RNAseq reads | 2679 |
| Single RNAseq reads | 7038 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008209 (2e-87) |
| Best Drosophila hit | CG9769 (2e-101) |
| Best Human hit | eukaryotic translation initiation factor 3 subunit F (2e-58) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 3 subunit F [Bombyx mori] (1e-121) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 3 subunit F [Bombyx mori] (5e-107) |
| GeneOntology terms | GO:0005852 eukaryotic translation initiation factor 3 complex GO:0006413 translational initiation GO:0003743 translation initiation factor activity GO:0048102 autophagic cell death GO:0035071 salivary gland cell autophagic cell death |
| InterPro families | IPR000555 Mov34/MPN/PAD-1 |
| Orthology group | MCL12714 |
Nucleotide sequence:
ATGGCACTCAATTTGTCTGTAAAGATTCATCCTGTTGTTTTATTTCAAATTGTGGATGCC
TACGAGCGTCGAAATGCAGACTCCCACCGCGTTATCGGCACTTTACTTGGCACATCCGAC
AAAGGTGTTGTAGAAGTCACAAATTGTTTCTGTGTTCCACACAAGGAACATGCCGACCAG
GTCGAAGCTGAGCTCAGCTATGCTATGGATGTTTATGAACTCAACCGAAGAGTCAATGCT
TCAGAGAACATTGTCGGATGGTGGGCGACAGGCAACGAAGTGACAAACCACTCCTCCGTG
ATTCACGAGTACTACTCCCGTGAATGTCGGGAGCCTGTTCACGTTACGCTGGACACGTCG
CTGGCCGGAGCCCGCATGGGTCTACGTGCGTACGTGTGTGTGGCGCTCGGAGTGCCCCGC
GGCAAGCAGGGCTGCATGTTCACACCCATCGATGTAGGACTCACCTACTACGAGCCGGAG
ATCGTGGGGCTCCAGCTGTGTCAGAAGACGATGGGTGGCGGGGGTCGCTCACGCCAGGTG
ACTCCGGCCGCTGACCTCGCACAGGTCGCCGACGCGGCCAACAAGCTCGCCGGCCTGCTC
GACCAGGTGTTGTCGTACGTAGAGGAGGTGGTGGCAGAGCGCGCGGCGCCCAACAAAGCG
GTGGGAAGGGAGCTGCTGGCGCTGGCCGCCTCGCTGCCGGACCTCTCGGCCTCCTCCTTC
GCCGACGCTTTCGCCTCCAGCGTCAAGGACCTGCTCATGGTGGTGACGCTGGCACAACTC
ATCAAGACGCAGCTGCAGCTCAACGAGAAGCTCACACTACTCACATCTCAGTGA
Protein sequence:
MALNLSVKIHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQ
VEAELSYAMDVYELNRRVNASENIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTS
LAGARMGLRAYVCVALGVPRGKQGCMFTPIDVGLTYYEPEIVGLQLCQKTMGGGGRSRQV
TPAADLAQVADAANKLAGLLDQVLSYVEEVVAERAAPNKAVGRELLALAASLPDLSASSF
ADAFASSVKDLLMVVTLAQLIKTQLQLNEKLTLLTSQ